C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00007F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059596-ENSDARG00000022203 CGP 7955 5:61095903-61249107
GeneTranscriptPositionBiotype
ENSDARG00000022203 (gtf2ird1)
GTF2I repeat domain-containing 1 		ENSDART00000074200 (gtf2ird1-201) 61208144-61249107 protein_coding
ENSDART00000148727 (gtf2ird1-001) 61192243-61249107 protein_coding
ENSDART00000149216 (gtf2ird1-002) 61216123-61219115 retained_intron
ENSDARG00000059596 (clip2)
CAP-GLY domain containing linker protein 2 		ENSDART00000082983 (clip2-201) 61118144-61177808 protein_coding
ENSDART00000148659 (clip2-001) 61095903-61178325 protein_coding
ENSDART00000149447 (clip2-003) 61134664-61177993 nonsense_mediated_decay
ENSDART00000150230 (clip2-002) 61147926-61160933 protein_coding
CIL_00007F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106665-ENSG00000006704 CGP 9606 7:74289475-74602604
GeneTranscriptPositionBiotype
ENSG00000006704 (GTF2IRD1)
GTF2I repeat domain containing 1 		ENST00000265755 (GTF2IRD1-001) 74453790-74602590 protein_coding
ENST00000424337 (GTF2IRD1-005) 74454109-74602601 protein_coding
ENST00000455841 (GTF2IRD1-002) 74453970-74602604 protein_coding
ENST00000470715 (GTF2IRD1-006) 74545762-74601106 protein_coding
ENST00000476977 (GTF2IRD1-003) 74505992-74602591 protein_coding
ENST00000486086 (GTF2IRD1-007) 74600960-74602583 retained_intron
ENST00000489094 (GTF2IRD1-004) 74508075-74559660 processed_transcript
ENSG00000106665 (CLIP2)
CAP-GLY domain containing linker protein 2 		ENST00000223398 (CLIP2-201) 74289475-74405943 protein_coding
ENST00000361545 (CLIP2-001) 74289475-74405930 protein_coding
ENST00000395060 (CLIP2-002) 74317547-74403848 protein_coding
ENST00000474962 (CLIP2-007) 74388670-74397173 retained_intron
ENST00000482424 (CLIP2-005) 74380024-74389149 retained_intron
ENST00000487091 (CLIP2-003) 74376070-74381041 retained_intron
ENST00000487447 (CLIP2-008) 74400482-74404326 protein_coding
ENST00000491075 (CLIP2-004) 74386384-74389432 retained_intron
ENST00000493166 (CLIP2-006) 74376695-74397165 protein_coding
ENSG00000252378 (AC004851.1)
 ENST00000516569 (AC004851.1-201) 74571347-74571424 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007F_0001ENSDARG00000022203ENSDART00000074200ENSDART00000148727ENSDART00000149216ENSDARG00000059596ENSDART00000082983ENSDART00000148659ENSDART00000149447ENSDART00000150230CIL_00007F_0002ENSG00000006704ENST00000265755ENST00000424337ENST00000455841ENST00000470715ENST00000476977ENST00000486086ENST00000489094ENSG00000106665ENST00000223398ENST00000361545ENST00000395060ENST00000474962ENST00000482424ENST00000487091ENST00000487447ENST00000491075ENST00000493166ENSG00000252378ENST00000516569
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007F_0001ENSDARG00000022203ENSDART00000074200ENSDART00000148727ENSDARG00000059596ENSDART00000082983ENSDART00000148659ENSDART00000149447ENSDART00000150230CIL_00007F_0002ENSG00000006704ENST00000265755ENST00000424337ENST00000455841ENST00000470715ENST00000476977ENST00000486086ENST00000489094ENSG00000106665ENST00000223398ENST00000361545ENST00000395060ENST00000487091ENSG00000252378ENST00000516569
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022203 ENSDART00000074200 N/A N/A N/A 2.609±0.70 N/A N/A 3.743±1.34 1.551±0.17 0.182±0.00 N/A 1.266±0.00 N/A N/A N/A
ENSDART00000148727 N/A N/A N/A 1.176±0.42 N/A N/A 0.675±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059596 ENSDART00000082983 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A 0.068±0.00 N/A N/A N/A N/A N/A
ENSDART00000148659 N/A N/A N/A 3.136±0.00 N/A N/A 0.196±0.00 0.097±0.00 N/A N/A 0.176±0.00 N/A N/A N/A
ENSDART00000149447 N/A N/A N/A N/A N/A N/A 0.423±0.00 N/A 0.123±0.00 N/A 0.410±0.00 N/A N/A N/A
ENSDART00000150230 N/A N/A N/A N/A N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006704 ENST00000265755 0.957±0.00 N/A N/A 0.751±0.00 0.931±0.00 1.215±0.19 0.125±0.00 N/A 0.410±0.00 N/A 5.185±2.99 2.561±1.13 0.953±0.65 1.302±0.00
ENST00000424337 0.736±0.00 1.826±0.00 1.469±0.00 2.851±0.00 2.073±1.52 2.622±0.00 2.381±0.00 1.286±0.82 0.264±0.00 4.295±0.00 34.412±0.00 4.143±2.29 3.062±0.99 1.973±0.61
ENST00000455841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.098±0.00
ENST00000470715 1.425±0.00 N/A N/A N/A N/A 5.411±0.00 N/A 7.411±0.00 0.601±0.00 4.887±0.00 31.357±0.00 N/A N/A 3.050±0.00
ENST00000476977 N/A N/A N/A N/A 0.274±0.00 0.076±0.00 N/A N/A N/A N/A N/A 1.235±0.00 0.158±0.00 N/A
ENST00000486086 N/A N/A N/A 1.609±0.00 3.156±0.00 N/A N/A N/A 0.666±0.00 N/A N/A N/A N/A N/A
ENST00000489094 N/A N/A N/A N/A N/A N/A N/A 0.351±0.00 0.838±0.00 0.259±0.00 N/A N/A N/A N/A
ENSG00000106665 ENST00000223398 N/A 1.054±0.00 N/A 14.352±11.96 N/A N/A N/A 1.383±0.00 0.459±0.00 N/A N/A N/A 1.306±0.24 N/A
ENST00000361545 6.163±0.00 5.531±0.00 0.852±0.00 4.618±2.47 3.114±1.21 8.732±7.27 0.778±0.57 1.344±1.12 0.856±0.35 8.451±0.00 1.041±0.00 18.561±19.59 7.560±0.02 4.130±1.52
ENST00000395060 N/A N/A 0.309±0.00 7.687±3.54 0.518±0.00 2.125±0.00 0.412±0.00 N/A 2.462±0.00 0.473±0.00 0.524±0.00 5.066±3.80 6.814±0.00 1.859±0.02
ENST00000474962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487091 N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A
ENST00000487447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252378 ENST00000516569 N/A N/A N/A 1.126±0.00 N/A 1.416±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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