C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP-GLY domain containing linker protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361545 CLIP2-001 ENSG00000106665 9606 + 7:74289475-74405930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361545 6.163±0.00 5.531±0.00 0.852±0.00 4.618±2.47 3.114±1.21 8.732±7.27 0.778±0.57 1.344±1.12 0.856±0.35 8.451±0.00 1.041±0.00 18.561±19.59 7.560±0.02 4.130±1.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007F CIL_00007F_0002 CGP 7:74289475-74602604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005875 TAS microtubule associated complex
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036999 Clip2-201 protein_coding Mus_musculus 0 3277
ENSMUST00000100647 Clip2-202 protein_coding Mus_musculus 0 1711
ENSMUST00000031382 Clip1-008 protein_coding Mus_musculus 0 320
ENSMUST00000063905 Clip1-003 protein_coding Mus_musculus 0 318
ENSMUST00000111561 Clip1-005 protein_coding Mus_musculus 0 318
ENSMUST00000111566 Clip1-001 protein_coding Mus_musculus 0 318
ENSMUST00000111564 Clip1-002 protein_coding Mus_musculus 0 318
ENSMUST00000144121 Clip1-006 nonsense_mediated_decay Mus_musculus 0 309
ENSMUST00000137363 Clip1-007 protein_coding Mus_musculus 0 246

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