C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prostaglandin reductase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106853 PTGR1 9606 - 9:111549722-111599855 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309195 PTGR1-001 111562967-111599407 protein_coding
  ENST00000374308 PTGR1-005 111592367-111599407 retained_intron
  ENST00000374313 PTGR1-003 111592298-111599816 retained_intron
  ENST00000374324 PTGR1-004 111562973-111597432 nonsense_mediated_decay
  ENST00000407693 PTGR1-201 111562967-111599855 protein_coding
  ENST00000422125 PTGR1-002 111583552-111599695 protein_coding
  ENST00000466771 PTGR1-006 111562577-111578900 nonsense_mediated_decay
  ENST00000485319 PTGR1-007 111592691-111597413 retained_intron
  ENST00000538962 PTGR1-202 111549722-111599855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309195ENST00000374313ENST00000407693ENST00000466771ENST00000538962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309195 7.273±0.00 2.739±0.00 6.529±0.00 8.365±0.00 10.285±5.82 10.138±8.44 5.830±2.50 71.465±15.17 31.837±18.95 10.242±0.00 1.384±0.42 12.820±5.27 7.648±1.61 7.630±3.61
ENST00000374313 N/A 1.725±0.00 4.370±0.00 N/A N/A N/A 1.983±0.74 N/A N/A N/A 0.532±0.00 N/A N/A N/A
ENST00000407693 N/A N/A 5.675±0.00 N/A N/A N/A N/A 36.064±0.00 47.217±0.00 0.976±0.00 N/A 9.964±5.38 3.869±2.37 8.446±0.00
ENST00000466771 3.108±0.00 N/A N/A N/A N/A N/A N/A 18.073±0.00 32.794±0.00 N/A N/A N/A N/A N/A
ENST00000538962 N/A N/A N/A N/A 5.349±2.39 7.252±0.00 N/A 21.827±0.00 40.768±0.00 3.866±0.00 N/A 2.155±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XL CIL_0005XL_0001 CGP 9:111360692-111577844
CIL_0005XH CIL_0005XH_0001 CGP 9:111525159-111599855

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006691 NAS leukotriene metabolic process
GO:0008270 IEA zinc ion binding
GO:0009636 IEA response to toxic substance
GO:0016491 IEA oxidoreductase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0019369 TAS arachidonic acid metabolic process
GO:0019371 TAS cyclooxygenase pathway
GO:0032440 IEA 2-alkenal reductase [NAD(P)] activity
GO:0036132 IEA 13-prostaglandin reductase activity
GO:0044281 TAS small molecule metabolic process
GO:0047522 IEA 15-oxoprostaglandin 13-oxidase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:2001300 TAS lipoxin metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024877 ptgr1 prostaglandin reductase 1 protein_coding Danio_rerio
ENSDARG00000087017 PTGR1 (2 of 2) prostaglandin reductase 1 protein_coding Danio_rerio
ENSMUSG00000028378 Ptgr1 prostaglandin reductase 1 protein_coding Mus_musculus

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