C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005XH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173258-ENSG00000106853 CGP 9606 9:111525159-111599855
GeneTranscriptPositionBiotype
ENSG00000106853 (PTGR1)
prostaglandin reductase 1 		ENST00000309195 (PTGR1-001) 111562967-111599407 protein_coding
ENST00000374308 (PTGR1-005) 111592367-111599407 retained_intron
ENST00000374313 (PTGR1-003) 111592298-111599816 retained_intron
ENST00000374324 (PTGR1-004) 111562973-111597432 nonsense_mediated_decay
ENST00000407693 (PTGR1-201) 111562967-111599855 protein_coding
ENST00000422125 (PTGR1-002) 111583552-111599695 protein_coding
ENST00000466771 (PTGR1-006) 111562577-111578900 nonsense_mediated_decay
ENST00000485319 (PTGR1-007) 111592691-111597413 retained_intron
ENST00000538962 (PTGR1-202) 111549722-111599855 protein_coding
ENSG00000173258 (ZNF483)
zinc finger protein 483 		ENST00000309235 (ZNF483-002) 111525233-111544432 protein_coding
ENST00000355824 (ZNF483-201) 111525189-111539761 protein_coding
ENST00000358151 (ZNF483-001) 111525159-111577844 protein_coding
ENST00000374374 (ZNF483-003) 111525216-111528020 protein_coding
ENSG00000224644 (RP11-16L21.7)
 ENST00000450154 (RP11-16L21.7-001) 111574192-111575427 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005XH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038630-ENSMUSG00000028378 CGP 10090 4:58943628-58987119
GeneTranscriptPositionBiotype
ENSMUSG00000028378 (Ptgr1)
prostaglandin reductase 1 		ENSMUST00000030069 (Ptgr1-001) 58965439-58987119 protein_coding
ENSMUSG00000038630 (Zkscan16)
zinc finger with KRAB and SCAN domains 16 		ENSMUST00000107554 (Zkscan16-001) 58943628-58958355 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XH_0001ENSG00000106853ENST00000309195ENST00000374308ENST00000374313ENST00000374324ENST00000407693ENST00000422125ENST00000466771ENST00000485319ENST00000538962ENSG00000173258ENST00000309235ENST00000355824ENST00000358151ENST00000374374ENSG00000224644ENST00000450154CIL_0005XH_0002ENSMUSG00000028378ENSMUST00000030069ENSMUSG00000038630ENSMUST00000107554
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XH_0001ENSG00000106853ENST00000309195ENST00000374313ENST00000407693ENST00000466771ENST00000538962ENSG00000173258ENST00000309235ENST00000355824ENST00000358151ENST00000374374ENSG00000224644ENST00000450154CIL_0005XH_0002ENSMUSG00000028378ENSMUST00000030069ENSMUSG00000038630ENSMUST00000107554
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106853 ENST00000309195 7.273±0.00 2.739±0.00 6.529±0.00 8.365±0.00 10.285±5.82 10.138±8.44 5.830±2.50 71.465±15.17 31.837±18.95 10.242±0.00 1.384±0.42 12.820±5.27 7.648±1.61 7.630±3.61
ENST00000374308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374313 N/A 1.725±0.00 4.370±0.00 N/A N/A N/A 1.983±0.74 N/A N/A N/A 0.532±0.00 N/A N/A N/A
ENST00000374324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000407693 N/A N/A 5.675±0.00 N/A N/A N/A N/A 36.064±0.00 47.217±0.00 0.976±0.00 N/A 9.964±5.38 3.869±2.37 8.446±0.00
ENST00000422125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466771 3.108±0.00 N/A N/A N/A N/A N/A N/A 18.073±0.00 32.794±0.00 N/A N/A N/A N/A N/A
ENST00000485319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538962 N/A N/A N/A N/A 5.349±2.39 7.252±0.00 N/A 21.827±0.00 40.768±0.00 3.866±0.00 N/A 2.155±0.00 N/A N/A
ENSG00000173258 ENST00000309235 0.314±0.00 N/A 1.867±0.00 15.604±7.50 0.548±0.23 0.389±0.03 0.880±0.49 0.273±0.01 2.202±2.18 0.658±0.39 0.012±0.00 0.786±1.03 0.019±0.00 1.771±0.00
ENST00000355824 0.514±0.00 0.611±0.00 N/A N/A N/A 1.683±0.00 N/A 0.352±0.00 0.068±0.00 N/A 0.038±0.00 N/A 0.091±0.00 1.398±0.00
ENST00000358151 0.134±0.00 0.384±0.00 0.472±0.00 N/A 0.180±0.00 0.323±0.00 0.157±0.00 0.138±0.00 0.030±0.00 0.141±0.00 0.009±0.00 0.177±0.06 0.051±0.02 0.684±0.00
ENST00000374374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 0.485±0.00 0.026±0.00 N/A
ENSG00000224644 ENST00000450154 N/A N/A N/A 0.332±0.28 0.065±0.00 N/A N/A 0.070±0.00 N/A N/A N/A 0.120±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028378 ENSMUST00000030069 2.906±0.97 2.707±0.85 22.275±10.85 0.964±0.57 1.037±0.64 4.752±1.37 0.849±0.35 2.089±0.24 3.167±2.64 6.713±2.07 0.307±0.07 4.359±2.48 6.638±6.32 3.723±1.71
ENSMUSG00000038630 ENSMUST00000107554 0.094±0.05 0.312±0.05 0.039±0.01 4.669±0.00 0.037±0.02 0.033±0.00 0.030±0.01 0.054±0.02 0.053±0.01 0.038±0.00 0.022±0.01 0.252±0.22 0.059±0.06 0.270±0.05

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