C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin reductase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538962 PTGR1-202 ENSG00000106853 9606 - 9:111549722-111599855 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungOvaryENST00000538962
Transcript ID Breast Colon Kidney Liver Lung Ovary
ENST00000538962 5.349±2.39 7.252±0.00 21.827±0.00 40.768±0.00 3.866±0.00 2.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XL CIL_0005XL_0001 CGP 9:111360692-111577844
CIL_0005XH CIL_0005XH_0001 CGP 9:111525159-111599855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006691 NAS leukotriene metabolic process
GO:0008270 IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0019369 TAS arachidonic acid metabolic process
GO:0019371 TAS cyclooxygenase pathway
GO:0032440 IEA 2-alkenal reductase [NAD(P)] activity
GO:0036132 IEA 13-prostaglandin reductase activity
GO:0044281 TAS small molecule metabolic process
GO:0047522 IEA 15-oxoprostaglandin 13-oxidase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:2001300 TAS lipoxin metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030069 Ptgr1-001 protein_coding Mus_musculus 0 806

Loading