C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RGP1 retrograde golgi transport homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107185 RGP1 9606 + 9:35749287-35758575 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378078 RGP1-001 35749287-35758575 protein_coding
  ENST00000496906 RGP1-002 35749291-35754142 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378078ENST00000496906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378078 6.078±0.00 3.855±0.00 1.758±0.00 1.001±0.00 4.116±0.00 1.622±0.88 2.748±1.84 2.268±2.04 2.392±0.09 2.334±0.11 5.653±3.57 4.642±1.90 5.262±0.36 6.152±1.29
ENST00000496906 N/A N/A 1.615±0.00 N/A 1.424±0.00 N/A 0.884±0.00 1.306±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C2 CIL_0007C2_0001 CGP 9:35736866-35758575
CIL_0007C1 CIL_0007C1_0001 CGP 9:35749287-35758575

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0016020 IDA membrane
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0017137 IDA Rab GTPase binding
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0034066 IDA RIC1-RGP1 guanyl-nucleotide exchange factor complex
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0043234 IDA protein complex
GO:1903363 IMP negative regulation of cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006545 rgp1 RGP1 retrograde golgi transport homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000028468 Rgp1 RGP1 retrograde golgi transport homolog (S. cerevisiae) protein_coding Mus_musculus

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