C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007C2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070610-ENSG00000107185 CGP 9606 9:35736866-35758575
GeneTranscriptPositionBiotype
ENSG00000107175 (CREB3)
cAMP responsive element binding protein 3 		ENST00000353704 (CREB3-001) 35732335-35737004 protein_coding
ENST00000486056 (CREB3-002) 35732598-35736860 processed_transcript
ENST00000613913 (CREB3-201) 35732320-35737007 protein_coding
ENSG00000107185 (RGP1)
RGP1 retrograde golgi transport homolog (S. cerevisiae) 		ENST00000378078 (RGP1-001) 35749287-35758575 protein_coding
ENST00000496906 (RGP1-002) 35749291-35754142 retained_intron
ENSG00000228843 (RP11-112J3.15)
 ENST00000425499 (RP11-112J3.15-001) 35756712-35757940 antisense
CIL_0007C2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028467-ENSMUSG00000028468 CGP 10090 4:43566928-43587487
GeneTranscriptPositionBiotype
ENSMUSG00000028466 (Creb3)
cAMP responsive element binding protein 3 		ENSMUST00000102944 (Creb3-001) 43562332-43567060 protein_coding
ENSMUST00000126277 (Creb3-005) 43563267-43566527 retained_intron
ENSMUST00000132631 (Creb3-003) 43562947-43565316 protein_coding
ENSMUST00000138623 (Creb3-004) 43566015-43566704 retained_intron
ENSMUST00000159923 (Creb3-006) 43563430-43565550 retained_intron
ENSMUST00000167751 (Creb3-201) 43562813-43566797 protein_coding
ENSMUSG00000028467 (Gba2)
glucosidase beta 2 		ENSMUST00000030189 (Gba2-001) 43566928-43578873 protein_coding
ENSMUST00000128403 (Gba2-003) 43566928-43578089 retained_intron
ENSMUST00000130443 (Gba2-005) 43570762-43578636 protein_coding
ENSMUST00000139606 (Gba2-006) 43568394-43569642 retained_intron
ENSMUST00000144968 (Gba2-004) 43570356-43574054 processed_transcript
ENSMUST00000148426 (Gba2-007) 43566929-43578089 retained_intron
ENSMUST00000152251 (Gba2-002) 43566928-43578537 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C2_0001ENSG00000107175ENST00000353704ENST00000486056ENST00000613913ENSG00000107185ENST00000378078ENST00000496906ENSG00000228843ENST00000425499CIL_0007C2_0002ENSMUSG00000028466ENSMUST00000102944ENSMUST00000126277ENSMUST00000132631ENSMUST00000138623ENSMUST00000159923ENSMUST00000167751ENSMUSG00000028467ENSMUST00000030189ENSMUST00000128403ENSMUST00000130443ENSMUST00000139606ENSMUST00000144968ENSMUST00000148426ENSMUST00000152251
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C2_0001ENSG00000107175ENST00000353704ENST00000486056ENSG00000107185ENST00000378078ENST00000496906ENSG00000228843ENST00000425499CIL_0007C2_0002ENSMUSG00000028466ENSMUST00000102944ENSMUSG00000028467ENSMUST00000030189
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107175 ENST00000353704 N/A N/A N/A 9.857±0.00 N/A N/A N/A N/A N/A N/A N/A 37.583±0.00 N/A 63.283±0.00
ENST00000486056 N/A N/A N/A 24.530±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107185 ENST00000378078 6.078±0.00 3.855±0.00 1.758±0.00 1.001±0.00 4.116±0.00 1.622±0.88 2.748±1.84 2.268±2.04 2.392±0.09 2.334±0.11 5.653±3.57 4.642±1.90 5.262±0.36 6.152±1.29
ENST00000496906 N/A N/A 1.615±0.00 N/A 1.424±0.00 N/A 0.884±0.00 1.306±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000228843 ENST00000425499 15.591±0.00 15.328±0.00 N/A 17.560±0.00 10.964±0.00 8.016±0.00 N/A 15.653±0.00 N/A N/A N/A N/A N/A 12.722±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028466 ENSMUST00000102944 N/A N/A N/A 16.203±0.00 N/A N/A N/A N/A 19.829±0.68 N/A 13.330±0.67 N/A 83.545±11.34 N/A
ENSMUST00000126277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028467 ENSMUST00000030189 N/A N/A N/A 29.965±2.84 N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.225±3.98
ENSMUST00000128403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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