C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC23 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107651 SEC23IP 9606 + 10:119892711-119944658 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369075 SEC23IP-001 119892711-119944658 protein_coding
  ENST00000442952 SEC23IP-006 119902807-119904662 protein_coding
  ENST00000446561 SEC23IP-003 119902901-119915815 protein_coding
  ENST00000462222 SEC23IP-005 119914500-119917925 processed_transcript
  ENST00000470478 SEC23IP-004 119892745-119898327 processed_transcript
  ENST00000475542 SEC23IP-007 119929645-119933770 processed_transcript
  ENST00000483890 SEC23IP-002 119941181-119942502 processed_transcript
  ENST00000543134 SEC23IP-201 119892783-119915807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369075ENST00000543134
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369075 3.650±0.00 4.581±0.00 N/A 1.421±0.22 2.240±1.76 2.845±0.00 1.114±0.82 3.402±2.07 2.075±0.74 1.830±0.16 2.936±0.00 2.882±1.17 3.092±0.68 5.988±0.00
ENST00000543134 5.007±0.00 N/A 4.766±0.00 3.356±0.00 8.469±0.00 7.225±0.00 2.865±0.38 3.334±0.00 7.073±0.00 4.449±1.27 0.840±0.00 9.915±0.00 3.411±0.16 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047E CIL_00047E_0002 CGP 10:119829404-119944658
CIL_0005R0 CIL_0005R0_0001 CGP 10:119892711-120589855

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001675 IEA acrosome assembly
GO:0005515 IEA protein binding
GO:0005737 TAS cytoplasm
GO:0005793 TAS endoplasmic reticulum-Golgi intermediate compartment
GO:0005801 IEA cis-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0007030 TAS Golgi organization
GO:0007286 IEA spermatid development
GO:0007338 IEA single fertilization
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0070971 IEA endoplasmic reticulum exit site
GO:0097038 IEA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061413 sec23ip SEC23 interacting protein protein_coding Danio_rerio
ENSMUSG00000055319 Sec23ip Sec23 interacting protein protein_coding Mus_musculus

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