C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC23 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543134 SEC23IP-201 ENSG00000107651 9606 + 10:119892783-119915807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000543134
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000543134 5.007±0.00 4.766±0.00 3.356±0.00 8.469±0.00 7.225±0.00 2.865±0.38 3.334±0.00 7.073±0.00 4.449±1.27 0.840±0.00 9.915±0.00 3.411±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047E CIL_00047E_0002 CGP 10:119829404-119944658
CIL_0005R0 CIL_0005R0_0001 CGP 10:119892711-120589855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 TAS cytoplasm
GO:0005793 TAS endoplasmic reticulum-Golgi intermediate compartment
GO:0006886 TAS intracellular protein transport
GO:0007030 TAS Golgi organization
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042942 Sec23ip-201 protein_coding Mus_musculus 0 1417

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