C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC23 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369075 SEC23IP-001 ENSG00000107651 9606 + 10:119892711-119944658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369075
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369075 3.650±0.00 4.581±0.00 1.421±0.22 2.240±1.76 2.845±0.00 1.114±0.82 3.402±2.07 2.075±0.74 1.830±0.16 2.936±0.00 2.882±1.17 3.092±0.68 5.988±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047E CIL_00047E_0002 CGP 10:119829404-119944658
CIL_0005R0 CIL_0005R0_0001 CGP 10:119892711-120589855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001675 IEA acrosome assembly
GO:0005515 IEA protein binding
GO:0005737 TAS cytoplasm
GO:0005793 TAS endoplasmic reticulum-Golgi intermediate compartment
GO:0005801 IEA cis-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0007030 TAS Golgi organization
GO:0007286 IEA spermatid development
GO:0007338 IEA single fertilization
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0070971 IEA endoplasmic reticulum exit site
GO:0097038 IEA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042942 Sec23ip-201 protein_coding Mus_musculus 0 3175

Loading