C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vesicle amine transport 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108828 VAT1 9606 - 17:43014605-43025123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355653 VAT1-001 43014605-43022418 protein_coding
  ENST00000420567 VAT1-002 43015918-43020273 protein_coding
  ENST00000587062 VAT1-004 43018749-43025122 protein_coding
  ENST00000587147 VAT1-008 43016067-43018045 protein_coding
  ENST00000587173 VAT1-003 43015899-43022356 protein_coding
  ENST00000589709 VAT1-006 43017842-43019555 protein_coding
  ENST00000589828 VAT1-007 43018122-43019027 protein_coding
  ENST00000590924 VAT1-005 43017832-43025123 protein_coding
  ENST00000592388 VAT1-009 43014607-43016313 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355653ENST00000589709ENST00000592388
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355653 269.554±0.00 45.601±0.00 1.257±0.00 15.033±14.03 59.164±55.25 78.781±74.04 13.837±11.70 60.918±0.00 13.902±10.12 67.691±60.88 19.880±0.00 85.125±74.68 88.977±37.77 70.394±51.19
ENST00000589709 N/A N/A 7.344±0.00 5.153±0.00 N/A N/A N/A N/A 15.474±0.00 8.532±0.00 1.892±0.00 18.000±0.00 N/A N/A
ENST00000592388 N/A 33.593±0.00 N/A N/A N/A N/A N/A N/A 13.004±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063T CIL_00063T_0001 CGP 17:43006725-43025123
CIL_00061G CIL_00061G_0001 CGP 17:43014605-43032036

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005741 IEA mitochondrial outer membrane
GO:0008270 IEA zinc ion binding
GO:0010637 IMP negative regulation of mitochondrial fusion
GO:0016021 TAS integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056481 vat1 vesicle amine transport protein 1 homolog (T californica) protein_coding Danio_rerio
ENSMUSG00000034993 Vat1 vesicle amine transport protein 1 homolog (T californica) protein_coding Mus_musculus

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