C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vesicle amine transport 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355653 VAT1-001 ENSG00000108828 9606 - 17:43014605-43022418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355653
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355653 269.554±0.00 45.601±0.00 1.257±0.00 15.033±14.03 59.164±55.25 78.781±74.04 13.837±11.70 60.918±0.00 13.902±10.12 67.691±60.88 19.880±0.00 85.125±74.68 88.977±37.77 70.394±51.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063T CIL_00063T_0001 CGP 17:43006725-43025123
CIL_00061G CIL_00061G_0001 CGP 17:43014605-43032036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005741 IEA mitochondrial outer membrane
GO:0008270 IEA zinc ion binding
GO:0010637 IMP negative regulation of mitochondrial fusion
GO:0016021 TAS integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040430 Vat1-001 protein_coding Mus_musculus 0 1328

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