C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat and SOCS box containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109046 WSB1 9606 + 17:27294076-27313631 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262394 WSB1-001 27294080-27313631 protein_coding
  ENST00000348811 WSB1-002 27294131-27312887 protein_coding
  ENST00000427287 WSB1-005 27294114-27307992 protein_coding
  ENST00000467843 WSB1-003 27294093-27313631 retained_intron
  ENST00000487603 WSB1-004 27302435-27308207 retained_intron
  ENST00000578312 WSB1-008 27294080-27303411 processed_transcript
  ENST00000579733 WSB1-006 27294103-27308847 protein_coding
  ENST00000581089 WSB1-014 27294122-27303749 retained_intron
  ENST00000581185 WSB1-007 27294114-27307789 protein_coding
  ENST00000581440 WSB1-009 27294076-27304903 protein_coding
  ENST00000582208 WSB1-015 27294189-27306858 nonsense_mediated_decay
  ENST00000583096 WSB1-017 27303320-27310172 retained_intron
  ENST00000583193 WSB1-012 27294112-27307870 protein_coding
  ENST00000583742 WSB1-010 27294087-27303422 protein_coding
  ENST00000583786 WSB1-013 27294114-27301950 processed_transcript
  ENST00000584114 WSB1-016 27294346-27309255 protein_coding
  ENST00000584354 WSB1-011 27294114-27302009 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262394ENST00000348811ENST00000427287ENST00000467843ENST00000487603ENST00000581185
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262394 2.721±0.00 19.950±0.00 N/A 5.599±0.00 9.917±2.78 6.597±0.00 4.989±0.00 3.123±0.00 3.842±0.96 14.730±1.70 1.051±0.00 21.695±14.44 28.003±6.18 19.708±14.12
ENST00000348811 N/A N/A N/A N/A N/A 6.791±0.00 3.957±0.00 N/A N/A N/A 2.625±0.00 N/A N/A N/A
ENST00000427287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.861±0.00 N/A N/A
ENST00000467843 2.089±0.00 9.057±0.00 5.826±0.00 14.786±0.00 8.644±5.12 2.716±1.41 2.728±0.45 7.755±0.00 5.695±4.79 7.537±0.42 N/A 13.573±6.76 3.640±0.43 9.043±0.00
ENST00000487603 N/A N/A 10.424±0.00 N/A N/A N/A N/A 4.650±0.00 9.958±0.00 21.971±0.00 2.585±0.00 N/A N/A N/A
ENST00000581185 N/A N/A N/A N/A N/A 4.845±0.00 N/A N/A 8.320±0.00 N/A N/A 4.129±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0001 VISTA 17:27271510-27874835

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IDA intracellular
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021343 wsb1 WD repeat and SOCS box-containing 1 protein_coding Danio_rerio
ENSMUSG00000017677 Wsb1 WD repeat and SOCS box-containing 1 protein_coding Mus_musculus

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