C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262394 WSB1-001 ENSG00000109046 9606 + 17:27294080-27313631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262394
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262394 2.721±0.00 19.950±0.00 5.599±0.00 9.917±2.78 6.597±0.00 4.989±0.00 3.123±0.00 3.842±0.96 14.730±1.70 1.051±0.00 21.695±14.44 28.003±6.18 19.708±14.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0001 VISTA 17:27271510-27874835

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IDA intracellular
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017821 Wsb1-001 protein_coding Mus_musculus 0 1930
ENSMUST00000150416 Wsb1-005 retained_intron Mus_musculus 0 898
ENSMUST00000153585 Wsb1-006 processed_transcript Mus_musculus 0 736
ENSMUST00000131818 Wsb1-003 nonsense_mediated_decay Mus_musculus 0 736
ENSMUST00000137890 Wsb1-004 retained_intron Mus_musculus 0 697
ENSMUST00000131848 Wsb1-002 nonsense_mediated_decay Mus_musculus 0 468
ENSMUST00000145772 Wsb1-007 nonsense_mediated_decay Mus_musculus 0 392

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