C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat and SOCS box-containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017677 Wsb1 10090 - 11:79239372-79254671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017821 Wsb1-001 79239372-79254671 protein_coding
  ENSMUST00000131818 Wsb1-003 79240276-79248659 nonsense_mediated_decay
  ENSMUST00000131848 Wsb1-002 79243400-79254470 nonsense_mediated_decay
  ENSMUST00000137890 Wsb1-004 79244108-79251024 retained_intron
  ENSMUST00000145772 Wsb1-007 79243288-79254669 nonsense_mediated_decay
  ENSMUST00000150416 Wsb1-005 79239388-79243024 retained_intron
  ENSMUST00000153585 Wsb1-006 79240307-79242949 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017821ENSMUST00000145772ENSMUST00000150416ENSMUST00000153585
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017821 13.508±3.07 9.187±4.08 17.366±6.71 75.005±30.80 9.366±2.99 20.369±4.22 2.864±0.82 9.950±4.75 8.892±5.03 18.637±1.72 2.342±0.88 11.668±2.98 12.880±4.11 4.269±1.45
ENSMUST00000145772 9.871±0.00 50.700±11.63 N/A 111.532±47.33 24.953±9.83 36.778±10.65 2.599±0.00 22.500±11.97 8.334±0.94 30.644±5.25 N/A 49.848±9.70 N/A 4.025±0.72
ENSMUST00000150416 N/A N/A N/A 2.357±0.00 3.954±0.54 N/A 2.006±0.33 N/A 5.063±1.63 10.685±0.00 0.933±0.35 6.563±3.10 3.356±0.27 1.309±0.00
ENSMUST00000153585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.442±0.36 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0002 VISTA 11:78750979-79355443
CIL_0001AY CIL_0001AY_0002 CGP 11:79013440-79254671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021343 wsb1 WD repeat and SOCS box-containing 1 protein_coding Danio_rerio
ENSG00000109046 WSB1 WD repeat and SOCS box containing 1 protein_coding Homo_sapiens

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