C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467843 WSB1-003 ENSG00000109046 9606 + 17:27294093-27313631 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000467843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000467843 2.089±0.00 9.057±0.00 5.826±0.00 14.786±0.00 8.644±5.12 2.716±1.41 2.728±0.45 7.755±0.00 5.695±4.79 7.537±0.42 13.573±6.76 3.640±0.43 9.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0001 VISTA 17:27271510-27874835

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150416 Wsb1-005 retained_intron Mus_musculus 0 1714
ENSMUST00000017821 Wsb1-001 protein_coding Mus_musculus 0 1035
ENSMUST00000131818 Wsb1-003 nonsense_mediated_decay Mus_musculus 0 968
ENSMUST00000131848 Wsb1-002 nonsense_mediated_decay Mus_musculus 0 789
ENSMUST00000145772 Wsb1-007 nonsense_mediated_decay Mus_musculus 0 739
ENSMUST00000153585 Wsb1-006 processed_transcript Mus_musculus 0 737
ENSMUST00000137890 Wsb1-004 retained_intron Mus_musculus 0 697

Loading