C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLAIN motif family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109171 SLAIN2 9606 + 4:48341322-48426212 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264313 SLAIN2-001 48341322-48426212 protein_coding
  ENST00000505131 SLAIN2-011 48379827-48394630 nonsense_mediated_decay
  ENST00000506375 SLAIN2-013 48369849-48379724 processed_transcript
  ENST00000510595 SLAIN2-012 48383678-48420489 protein_coding
  ENST00000512093 SLAIN2-009 48377901-48425015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264313ENST00000505131ENST00000510595ENST00000512093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264313 2.951±0.00 1.091±0.00 1.062±0.00 N/A 1.719±0.91 2.307±1.80 1.370±0.81 1.574±0.80 1.743±0.67 2.925±0.00 3.699±0.00 1.690±0.36 2.158±0.48 5.679±0.00
ENST00000505131 N/A N/A 27.796±0.00 26.524±0.00 7.527±0.00 9.681±0.00 5.488±0.00 14.465±0.00 N/A 22.907±0.00 9.959±0.00 N/A N/A N/A
ENST00000510595 N/A N/A N/A N/A N/A N/A N/A 10.174±0.00 N/A N/A N/A N/A N/A N/A
ENST00000512093 8.557±0.00 4.996±0.00 1.075±0.00 1.918±0.52 7.600±0.00 7.045±3.52 5.146±3.80 3.774±1.91 3.736±0.99 4.816±0.43 7.647±5.68 4.542±1.51 5.086±0.54 18.026±3.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MX CIL_0001MX_0001 CGP 4:48135783-48426212

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0007020 IMP microtubule nucleation
GO:0015630 IDA microtubule cytoskeleton
GO:0031113 IEA regulation of microtubule polymerization
GO:0031116 IMP positive regulation of microtubule polymerization
GO:0031122 IMP cytoplasmic microtubule organization
GO:0035371 IDA microtubule plus-end

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032114 slain2 SLAIN motif family, member 2 protein_coding Danio_rerio
ENSMUSG00000036087 Slain2 SLAIN motif family, member 2 protein_coding Mus_musculus

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