C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLAIN motif family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036087 Slain2 10090 + 5:72914304-72978829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000143829 Slain2-002 72914625-72978829 protein_coding
  ENSMUST00000144843 Slain2-001 72914304-72978829 protein_coding
  ENSMUST00000145939 Slain2-003 72948499-72974702 retained_intron
  ENSMUST00000183284 Slain2-004 72914418-72918485 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143829ENSMUST00000144843ENSMUST00000145939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143829 2.965±0.66 N/A 5.072±0.34 N/A 2.922±0.90 N/A 6.796±1.61 1.585±0.02 1.261±0.30 4.071±0.95 17.069±1.61 2.983±0.97 1.760±0.68 N/A
ENSMUST00000144843 6.513±2.41 15.969±2.50 4.181±0.12 6.280±3.75 7.842±3.70 14.315±1.10 9.876±1.01 8.106±1.49 4.204±1.07 14.462±3.33 5.176±1.11 12.914±4.95 4.196±1.54 41.139±15.36
ENSMUST00000145939 N/A N/A N/A N/A 4.503±0.55 N/A 9.112±0.60 7.215±0.00 2.870±0.00 N/A N/A N/A 8.421±1.88 39.239±8.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MX CIL_0001MX_0002 CGP 5:72755718-72978829

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0007020 ISS microtubule nucleation
GO:0015630 ISS microtubule cytoskeleton
GO:0031113 IMP regulation of microtubule polymerization
GO:0031116 ISS positive regulation of microtubule polymerization
GO:0031122 IMP cytoplasmic microtubule organization
GO:0035371 ISS microtubule plus-end

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032114 slain2 SLAIN motif family, member 2 protein_coding Danio_rerio
ENSG00000109171 SLAIN2 SLAIN motif family, member 2 protein_coding Homo_sapiens

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