C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLAIN motif family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505131 SLAIN2-011 ENSG00000109171 9606 + 4:48379827-48394630 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleENST00000505131
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle
ENST00000505131 27.796±0.00 26.524±0.00 7.527±0.00 9.681±0.00 5.488±0.00 14.465±0.00 22.907±0.00 9.959±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MX CIL_0001MX_0001 CGP 4:48135783-48426212

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145939 Slain2-003 retained_intron Mus_musculus 1e-30 137
ENSMUST00000143829 Slain2-002 protein_coding Mus_musculus 1e-30 137
ENSMUST00000144843 Slain2-001 protein_coding Mus_musculus 1e-30 137

Loading