C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLAIN motif family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264313 SLAIN2-001 ENSG00000109171 9606 + 4:48341322-48426212 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264313
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264313 2.951±0.00 1.091±0.00 1.062±0.00 1.719±0.91 2.307±1.80 1.370±0.81 1.574±0.80 1.743±0.67 2.925±0.00 3.699±0.00 1.690±0.36 2.158±0.48 5.679±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MX CIL_0001MX_0001 CGP 4:48135783-48426212

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0007020 IMP microtubule nucleation
GO:0015630 IDA microtubule cytoskeleton
GO:0031113 IEA regulation of microtubule polymerization
GO:0031116 IMP positive regulation of microtubule polymerization
GO:0031122 IMP cytoplasmic microtubule organization
GO:0035371 IDA microtubule plus-end

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144843 Slain2-001 protein_coding Mus_musculus 0 3160
ENSMUST00000143829 Slain2-002 protein_coding Mus_musculus 0 1838
ENSMUST00000145939 Slain2-003 retained_intron Mus_musculus 0 1122
ENSMUST00000063874 Gm9870-201 pseudogene Mus_musculus 0 676
ENSMUST00000183284 Slain2-004 retained_intron Mus_musculus 0 641
ENSMUST00000043711 Gm10135-201 protein_coding Mus_musculus 0 226

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