C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DCN1, defective in cullin neddylation 1, domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109184 DCUN1D4 9606 + 4:51843000-51916837 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334635 DCUN1D4-001 51843063-51916837 protein_coding
  ENST00000381441 DCUN1D4-002 51843063-51916837 protein_coding
  ENST00000451288 DCUN1D4-201 51843579-51916835 protein_coding
  ENST00000477560 DCUN1D4-003 51843197-51916837 nonsense_mediated_decay
  ENST00000502930 DCUN1D4-008 51843133-51891823 nonsense_mediated_decay
  ENST00000504113 DCUN1D4-009 51843131-51887190 processed_transcript
  ENST00000504661 DCUN1D4-013 51844884-51874367 processed_transcript
  ENST00000504923 DCUN1D4-014 51877456-51891851 retained_intron
  ENST00000505403 DCUN1D4-012 51843579-51891851 protein_coding
  ENST00000505634 DCUN1D4-017 51886568-51913835 nonsense_mediated_decay
  ENST00000506673 DCUN1D4-007 51843103-51877798 nonsense_mediated_decay
  ENST00000507659 DCUN1D4-016 51884911-51913642 processed_transcript
  ENST00000507741 DCUN1D4-005 51843153-51914036 nonsense_mediated_decay
  ENST00000508257 DCUN1D4-020 51909400-51914102 processed_transcript
  ENST00000509068 DCUN1D4-011 51843541-51891851 nonsense_mediated_decay
  ENST00000509376 DCUN1D4-004 51843000-51914294 nonsense_mediated_decay
  ENST00000510518 DCUN1D4-021 51910753-51913392 retained_intron
  ENST00000510587 DCUN1D4-015 51884326-51911114 processed_transcript
  ENST00000510808 DCUN1D4-018 51891807-51913835 protein_coding
  ENST00000511675 DCUN1D4-006 51843061-51877972 retained_intron
  ENST00000512199 DCUN1D4-019 51899337-51913723 nonsense_mediated_decay
  ENST00000513800 DCUN1D4-010 51843153-51875328 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334635ENST00000381441ENST00000451288ENST00000477560ENST00000502930ENST00000504113ENST00000505403ENST00000506673ENST00000507741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334635 2.345±0.00 1.473±0.00 0.973±0.00 4.283±0.58 2.360±0.79 4.479±0.00 2.247±0.00 1.877±0.00 2.909±0.45 2.520±1.21 0.966±0.00 3.115±1.86 1.002±0.50 4.314±1.48
ENST00000381441 1.442±0.00 0.368±0.00 N/A 1.800±0.02 1.262±0.46 N/A 1.522±0.17 2.663±0.65 2.425±0.00 1.451±0.00 0.756±0.36 2.323±0.12 0.347±0.04 3.885±0.00
ENST00000451288 N/A N/A N/A N/A N/A 1.836±0.00 N/A N/A N/A N/A N/A N/A 0.335±0.00 N/A
ENST00000477560 0.685±0.00 0.606±0.00 0.738±0.00 1.242±0.00 0.850±0.00 0.861±0.00 N/A N/A N/A N/A N/A 1.328±0.33 N/A 2.440±0.00
ENST00000502930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.075±0.00 N/A N/A
ENST00000504113 N/A N/A 7.410±0.00 19.381±0.00 8.047±0.00 11.598±0.00 7.937±0.00 N/A 33.040±0.00 12.662±0.00 N/A 9.154±0.00 2.165±0.00 17.155±0.00
ENST00000505403 N/A N/A N/A N/A N/A N/A N/A N/A 13.569±0.00 N/A N/A 5.215±0.72 3.859±0.00 28.453±0.00
ENST00000506673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.767±0.00 N/A N/A N/A
ENST00000507741 N/A N/A 1.945±0.00 4.554±0.00 N/A 2.288±0.00 1.562±0.00 4.202±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MT CIL_0001MT_0001 CGP 4:48986247-51916837
CIL_0001MS CIL_0001MS_0001 CGP 4:51843000-52017620

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092394 dcun1d4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000051674 Dcun1d4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein_coding Mus_musculus

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