C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DCN1, defective in cullin neddylation 1, domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334635 DCUN1D4-001 ENSG00000109184 9606 + 4:51843063-51916837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334635
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334635 2.345±0.00 1.473±0.00 0.973±0.00 4.283±0.58 2.360±0.79 4.479±0.00 2.247±0.00 1.877±0.00 2.909±0.45 2.520±1.21 0.966±0.00 3.115±1.86 1.002±0.50 4.314±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MT CIL_0001MT_0001 CGP 4:48986247-51916837
CIL_0001MS CIL_0001MS_0001 CGP 4:51843000-52017620

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063882 Dcun1d4-001 protein_coding Mus_musculus 0 1842
ENSMUST00000087181 Dcun1d4-002 protein_coding Mus_musculus 0 1535
ENSMUST00000113558 Dcun1d4-003 protein_coding Mus_musculus 0 907
ENSMUST00000136268 Dcun1d4-009 protein_coding Mus_musculus 0 636
ENSMUST00000130087 Dcun1d4-004 nonsense_mediated_decay Mus_musculus 0 636
ENSMUST00000145645 Dcun1d4-006 protein_coding Mus_musculus 0 616
ENSMUST00000134092 Dcun1d4-011 nonsense_mediated_decay Mus_musculus 0 418
ENSMUST00000133137 Dcun1d4-010 nonsense_mediated_decay Mus_musculus 0 396
ENSMUST00000156806 Dcun1d4-007 protein_coding Mus_musculus 0 372
ENSMUST00000141553 Dcun1d4-005 protein_coding Mus_musculus 0 326
ENSMUST00000034499 Dcun1d5-201 protein_coding Mus_musculus 0 230
ENSMUST00000149970 Dcun1d4-008 processed_transcript Mus_musculus 2.94273e-44 185

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