C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109654 TRIM2 9606 + 4:153152342-153339320 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338700 TRIM2-001 153204466-153339320 protein_coding
  ENST00000433687 TRIM2-010 153257410-153294370 protein_coding
  ENST00000437508 TRIM2-004 153153118-153336362 protein_coding
  ENST00000441616 TRIM2-006 153152493-153293024 protein_coding
  ENST00000460908 TRIM2-011 153322650-153324490 retained_intron
  ENST00000479711 TRIM2-009 153204446-153295683 processed_transcript
  ENST00000482578 TRIM2-002 153257403-153276268 retained_intron
  ENST00000491446 TRIM2-007 153152342-153157172 processed_transcript
  ENST00000494872 TRIM2-005 153204446-153310261 processed_transcript
  ENST00000496978 TRIM2-008 153204446-153222669 processed_transcript
  ENST00000502281 TRIM2-013 153257379-153270529 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338700ENST00000437508ENST00000494872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338700 1.589±0.00 1.883±0.00 4.135±0.00 42.423±10.97 2.626±0.00 6.363±0.45 1.613±0.21 7.541±5.78 1.676±0.00 2.002±0.50 0.299±0.03 6.333±2.32 0.442±0.08 1.922±1.83
ENST00000437508 N/A N/A 6.440±0.00 16.714±0.00 2.144±0.00 6.755±0.00 N/A 1.289±0.00 3.473±0.00 2.893±0.00 N/A 5.002±0.00 N/A N/A
ENST00000494872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.413±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008219 IEA cell death
GO:0008270 IEA:NAS zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0043523 ISS regulation of neuron apoptotic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031817 trim2a tripartite motif-containing 2a protein_coding Danio_rerio
ENSDARG00000076174 trim2b tripartite motif-containing 2b protein_coding Danio_rerio
ENSMUSG00000027993 Trim2 tripartite motif-containing 2 protein_coding Mus_musculus

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