C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HIV-1 Tat interactive protein 2, 30kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109854 HTATIP2 9606 + 11:20363685-20383783 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000419348 HTATIP2-001 20363743-20383782 protein_coding
  ENST00000421577 HTATIP2-004 20363723-20383334 protein_coding
  ENST00000443524 HTATIP2-003 20363725-20383368 protein_coding
  ENST00000451739 HTATIP2-002 20363797-20383783 protein_coding
  ENST00000530266 HTATIP2-006 20363685-20367625 protein_coding
  ENST00000531058 HTATIP2-009 20364180-20383616 protein_coding
  ENST00000532081 HTATIP2-007 20364141-20367655 protein_coding
  ENST00000532505 HTATIP2-005 20363854-20367513 protein_coding
  ENST00000533914 HTATIP2-008 20376017-20383778 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419348ENST00000421577ENST00000443524ENST00000451739ENST00000530266ENST00000531058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419348 6.896±0.00 7.376±0.00 N/A 2.740±0.44 4.188±0.59 9.342±2.00 1.671±1.10 7.814±1.74 13.008±10.63 12.848±0.00 10.138±0.00 8.028±3.06 16.205±3.89 5.522±1.38
ENST00000421577 N/A N/A 5.443±0.00 3.991±0.89 3.851±2.73 7.078±0.18 2.337±2.03 4.778±1.39 7.556±6.65 6.339±2.65 5.932±5.10 24.987±19.21 14.224±10.28 16.949±5.76
ENST00000443524 8.172±0.00 N/A N/A 2.526±0.00 2.476±0.00 7.447±0.00 N/A N/A N/A N/A 4.306±0.00 6.898±0.00 N/A N/A
ENST00000451739 N/A N/A N/A N/A 1.946±0.00 2.269±0.00 N/A 2.005±0.00 N/A N/A 1.209±0.00 7.029±0.00 N/A N/A
ENST00000530266 N/A N/A N/A 3.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531058 3.442±0.00 7.649±0.00 N/A 2.266±0.00 3.163±0.00 N/A N/A 9.620±0.00 N/A N/A N/A N/A N/A 3.787±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AP CIL_0004AP_0002 CGP 11:20156155-20383783
CIL_0004AQ CIL_0004AQ_0002 CGP 11:20363685-20509294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006915 IEA apoptotic process
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0030154 IEA cell differentiation
GO:0043066 TAS negative regulation of apoptotic process
GO:0045765 IDA regulation of angiogenesis
GO:0051170 IDA nuclear import
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028386 htatip2 HIV-1 Tat interactive protein 2 protein_coding Danio_rerio
ENSMUSG00000039745 Htatip2 HIV-1 tat interactive protein 2, homolog (human) protein_coding Mus_musculus

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