C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028386-ENSDARG00000019791 CGP 7955 7:17871519-17998778
GeneTranscriptPositionBiotype
ENSDARG00000019791 (prmt3)
protein arginine methyltransferase 3 		ENSDART00000013409 (prmt3-001) 17881492-17998778 protein_coding
ENSDART00000147140 (prmt3-002) 17896049-17965963 protein_coding
ENSDARG00000028386 (htatip2)
HIV-1 Tat interactive protein 2 		ENSDART00000035558 (htatip2-001) 17871519-17878421 protein_coding
ENSDART00000132706 (htatip2-004) 17872206-17875345 protein_coding
ENSDART00000140367 (htatip2-002) 17871581-17878414 retained_intron
ENSDART00000145357 (htatip2-003) 17872141-17878243 protein_coding
CIL_0004AQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109854-ENSG00000185238 CGP 9606 11:20363685-20509294
GeneTranscriptPositionBiotype
ENSG00000109854 (HTATIP2)
HIV-1 Tat interactive protein 2, 30kDa 		ENST00000419348 (HTATIP2-001) 20363743-20383782 protein_coding
ENST00000421577 (HTATIP2-004) 20363723-20383334 protein_coding
ENST00000443524 (HTATIP2-003) 20363725-20383368 protein_coding
ENST00000451739 (HTATIP2-002) 20363797-20383783 protein_coding
ENST00000530266 (HTATIP2-006) 20363685-20367625 protein_coding
ENST00000531058 (HTATIP2-009) 20364180-20383616 protein_coding
ENST00000532081 (HTATIP2-007) 20364141-20367655 protein_coding
ENST00000532505 (HTATIP2-005) 20363854-20367513 protein_coding
ENST00000533914 (HTATIP2-008) 20376017-20383778 retained_intron
ENSG00000185238 (PRMT3)
protein arginine methyltransferase 3 		ENST00000330796 (PRMT3-002) 20387558-20509294 nonsense_mediated_decay
ENST00000331079 (PRMT3-001) 20387530-20509253 protein_coding
ENST00000437750 (PRMT3-003) 20387716-20508708 protein_coding
ENST00000525188 (PRMT3-006) 20387640-20397662 nonsense_mediated_decay
ENST00000526583 (PRMT3-005) 20387747-20392251 nonsense_mediated_decay
ENST00000529592 (PRMT3-004) 20405446-20509282 retained_intron
CIL_0004AQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039745-ENSMUSG00000030505 CGP 10090 7:49759106-49858265
GeneTranscriptPositionBiotype
ENSMUSG00000030505 (Prmt3)
protein arginine N-methyltransferase 3 		ENSMUST00000032715 (Prmt3-001) 49778346-49858265 protein_coding
ENSMUST00000130907 (Prmt3-003) 49798390-49827090 protein_coding
ENSMUST00000140656 (Prmt3-002) 49778346-49782505 protein_coding
ENSMUST00000145666 (Prmt3-007) 49778544-49787314 processed_transcript
ENSMUST00000146052 (Prmt3-008) 49779876-49787344 protein_coding
ENSMUST00000147401 (Prmt3-005) 49778437-49826894 nonsense_mediated_decay
ENSMUST00000148996 (Prmt3-004) 49778439-49780635 processed_transcript
ENSMUST00000152127 (Prmt3-006) 49778437-49782162 processed_transcript
ENSMUSG00000039745 (Htatip2)
HIV-1 tat interactive protein 2, homolog (human) 		ENSMUST00000085272 (Htatip2-201) 49759106-49773999 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AQ_0001ENSDARG00000019791ENSDART00000013409ENSDART00000147140ENSDARG00000028386ENSDART00000035558ENSDART00000132706ENSDART00000140367ENSDART00000145357CIL_0004AQ_0002ENSG00000109854ENST00000419348ENST00000421577ENST00000443524ENST00000451739ENST00000530266ENST00000531058ENST00000532081ENST00000532505ENST00000533914ENSG00000185238ENST00000330796ENST00000331079ENST00000437750ENST00000525188ENST00000526583ENST00000529592CIL_0004AQ_0003ENSMUSG00000030505ENSMUST00000032715ENSMUST00000130907ENSMUST00000140656ENSMUST00000145666ENSMUST00000146052ENSMUST00000147401ENSMUST00000148996ENSMUST00000152127ENSMUSG00000039745ENSMUST00000085272
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AQ_0001ENSDARG00000019791ENSDART00000013409ENSDARG00000028386ENSDART00000035558ENSDART00000140367ENSDART00000145357CIL_0004AQ_0002ENSG00000109854ENST00000419348ENST00000421577ENST00000443524ENST00000451739ENST00000530266ENST00000531058ENSG00000185238ENST00000330796ENST00000331079ENST00000437750ENST00000529592CIL_0004AQ_0003ENSMUSG00000030505ENSMUST00000032715ENSMUST00000140656ENSMUST00000146052ENSMUST00000147401ENSMUSG00000039745ENSMUST00000085272
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019791 ENSDART00000013409 N/A N/A N/A 2.087±1.80 N/A N/A 4.308±0.02 3.946±5.16 2.844±0.00 N/A 2.560±0.00 N/A N/A N/A
ENSDART00000147140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000028386 ENSDART00000035558 N/A N/A N/A 15.391±7.37 N/A N/A 8.486±2.57 20.010±8.12 N/A N/A 0.900±0.00 N/A N/A N/A
ENSDART00000132706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140367 N/A N/A N/A 2.099±0.23 N/A N/A 1.156±0.43 2.629±0.92 N/A N/A 0.138±0.00 N/A N/A N/A
ENSDART00000145357 N/A N/A N/A 2.391±0.74 N/A N/A 2.053±0.55 3.407±0.00 0.515±0.00 N/A 0.951±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109854 ENST00000419348 6.896±0.00 7.376±0.00 N/A 2.740±0.44 4.188±0.59 9.342±2.00 1.671±1.10 7.814±1.74 13.008±10.63 12.848±0.00 10.138±0.00 8.028±3.06 16.205±3.89 5.522±1.38
ENST00000421577 N/A N/A 5.443±0.00 3.991±0.89 3.851±2.73 7.078±0.18 2.337±2.03 4.778±1.39 7.556±6.65 6.339±2.65 5.932±5.10 24.987±19.21 14.224±10.28 16.949±5.76
ENST00000443524 8.172±0.00 N/A N/A 2.526±0.00 2.476±0.00 7.447±0.00 N/A N/A N/A N/A 4.306±0.00 6.898±0.00 N/A N/A
ENST00000451739 N/A N/A N/A N/A 1.946±0.00 2.269±0.00 N/A 2.005±0.00 N/A N/A 1.209±0.00 7.029±0.00 N/A N/A
ENST00000530266 N/A N/A N/A 3.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531058 3.442±0.00 7.649±0.00 N/A 2.266±0.00 3.163±0.00 N/A N/A 9.620±0.00 N/A N/A N/A N/A N/A 3.787±0.00
ENST00000532081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185238 ENST00000330796 N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 N/A 0.564±0.24 1.425±0.44 0.300±0.00 0.910±0.00
ENST00000331079 1.183±0.00 1.252±0.00 1.139±0.00 2.854±0.17 1.909±0.00 1.069±0.16 1.442±1.05 1.615±0.84 1.212±0.47 0.785±0.00 1.862±0.00 3.505±1.42 1.630±0.43 1.609±0.25
ENST00000437750 0.922±0.00 1.773±0.00 0.342±0.00 1.260±0.00 0.473±0.00 1.061±0.24 1.286±0.00 0.639±0.17 0.557±0.00 0.998±0.00 0.985±0.47 4.175±2.96 N/A 2.652±0.00
ENST00000525188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529592 N/A N/A 0.187±0.00 0.519±0.00 0.812±0.00 1.277±0.00 0.364±0.00 0.340±0.08 1.128±0.00 0.736±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030505 ENSMUST00000032715 7.112±2.51 6.440±0.47 8.099±1.16 9.922±4.41 5.762±2.30 4.268±1.00 4.125±0.13 5.909±0.98 5.987±4.02 4.109±1.33 3.950±0.77 11.630±3.66 8.082±3.43 1.520±0.53
ENSMUST00000130907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140656 N/A 46.429±10.98 N/A N/A 28.120±14.04 13.724±3.81 N/A 8.793±0.00 1.575±0.30 11.556±5.31 N/A 46.531±4.51 N/A 1.229±0.22
ENSMUST00000145666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.543±0.00
ENSMUST00000147401 N/A N/A N/A 3.472±0.00 N/A N/A N/A N/A N/A N/A N/A 8.366±0.00 6.698±0.00 0.548±0.00
ENSMUST00000148996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039745 ENSMUST00000085272 3.230±1.96 7.466±3.93 10.563±2.17 1.716±1.62 1.646±0.36 3.520±2.47 0.902±0.13 3.801±1.40 9.085±4.58 3.329±2.84 1.565±1.23 5.770±5.19 11.765±6.32 2.621±0.17

Loading