C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HIV-1 Tat interactive protein 2, 30kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421577 HTATIP2-004 ENSG00000109854 9606 + 11:20363723-20383334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421577
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421577 5.443±0.00 3.991±0.89 3.851±2.73 7.078±0.18 2.337±2.03 4.778±1.39 7.556±6.65 6.339±2.65 5.932±5.10 24.987±19.21 14.224±10.28 16.949±5.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AP CIL_0004AP_0002 CGP 11:20156155-20383783
CIL_0004AQ CIL_0004AQ_0002 CGP 11:20363685-20509294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006915 IEA apoptotic process
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0030154 IEA cell differentiation
GO:0043066 TAS negative regulation of apoptotic process
GO:0045765 IDA regulation of angiogenesis
GO:0051170 IDA nuclear import
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085272 Htatip2-201 protein_coding Mus_musculus 0 804

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