C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HIV-1 Tat interactive protein 2, 30kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419348 HTATIP2-001 ENSG00000109854 9606 + 11:20363743-20383782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419348
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419348 6.896±0.00 7.376±0.00 2.740±0.44 4.188±0.59 9.342±2.00 1.671±1.10 7.814±1.74 13.008±10.63 12.848±0.00 10.138±0.00 8.028±3.06 16.205±3.89 5.522±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AP CIL_0004AP_0002 CGP 11:20156155-20383783
CIL_0004AQ CIL_0004AQ_0002 CGP 11:20363685-20509294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006915 IEA apoptotic process
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0030154 IEA cell differentiation
GO:0043066 TAS negative regulation of apoptotic process
GO:0045765 IDA regulation of angiogenesis
GO:0051170 IDA nuclear import
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085272 Htatip2-201 protein_coding Mus_musculus 0 813

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