C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421419 ATG2A-201 ENSG00000110046 9606 - 11:64894572-64917211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungOvaryPlacentaTestisENST00000421419
Transcript ID Adrenal Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000421419 5.452±0.00 3.571±0.00 5.212±0.00 4.385±0.00 4.432±0.00 5.135±0.00 3.716±0.52 3.583±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IBA autophagic vacuole assembly
GO:0000407 IBA pre-autophagosomal structure
GO:0000422 IBA mitochondrion degradation
GO:0005515 IPI protein binding
GO:0005811 IEA lipid particle
GO:0006995 IBA cellular response to nitrogen starvation
GO:0019898 IBA extrinsic component of membrane
GO:0044804 IBA nucleophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145600 Atg2a-002 protein_coding Mus_musculus 0 689
ENSMUST00000045351 Atg2a-001 protein_coding Mus_musculus 0 689
ENSMUST00000143053 Atg2a-005 retained_intron Mus_musculus 0 355
ENSMUST00000151079 Atg2a-003 retained_intron Mus_musculus 5e-37 159

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