C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377264 ATG2A-001 ENSG00000110046 9606 - 11:64894546-64917248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000377264
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000377264 3.267±0.00 2.346±1.59 1.079±0.50 0.800±0.64 1.943±0.00 1.111±0.00 0.791±0.47 0.516±0.31 2.041±1.91 2.061±1.02 1.761±0.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IBA autophagic vacuole assembly
GO:0000407 IBA pre-autophagosomal structure
GO:0000422 IBA mitochondrion degradation
GO:0005515 IPI protein binding
GO:0005811 IEA lipid particle
GO:0006995 IBA cellular response to nitrogen starvation
GO:0019898 IBA extrinsic component of membrane
GO:0044804 IBA nucleophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045351 Atg2a-001 protein_coding Mus_musculus 0 2924
ENSMUST00000145600 Atg2a-002 protein_coding Mus_musculus 0 2896
ENSMUST00000151079 Atg2a-003 retained_intron Mus_musculus 0 856
ENSMUST00000143053 Atg2a-005 retained_intron Mus_musculus 0 396
ENSMUST00000135018 Atg2a-004 retained_intron Mus_musculus 0.000000000007 79

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