C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FAD-dependent oxidoreductase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110074 FOXRED1 9606 + 11:126269055-126278131 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263578 FOXRED1-002 126269133-126278124 protein_coding
  ENST00000524751 FOXRED1-019 126269194-126275349 retained_intron
  ENST00000525083 FOXRED1-004 126269171-126277663 retained_intron
  ENST00000525770 FOXRED1-005 126269171-126277840 nonsense_mediated_decay
  ENST00000526366 FOXRED1-011 126269192-126275012 processed_transcript
  ENST00000526525 FOXRED1-012 126269171-126273309 retained_intron
  ENST00000527004 FOXRED1-003 126269190-126278069 nonsense_mediated_decay
  ENST00000527875 FOXRED1-015 126273089-126275143 retained_intron
  ENST00000529802 FOXRED1-009 126269157-126271881 retained_intron
  ENST00000530642 FOXRED1-008 126273914-126278126 retained_intron
  ENST00000531257 FOXRED1-018 126273034-126274089 retained_intron
  ENST00000532101 FOXRED1-010 126269201-126275867 retained_intron
  ENST00000532125 FOXRED1-001 126269209-126277931 protein_coding
  ENST00000532590 FOXRED1-017 126276912-126277844 retained_intron
  ENST00000533395 FOXRED1-016 126273091-126276219 retained_intron
  ENST00000533839 FOXRED1-013 126269055-126276477 processed_transcript
  ENST00000534011 FOXRED1-006 126269135-126278131 processed_transcript
  ENST00000534315 FOXRED1-007 126270945-126278126 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENST00000263578
Transcript ID Brain Placenta
ENST00000263578 7.557±0.00 22.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423
CIL_00050Z CIL_00050Z_0002 CGP 11:126211414-126269144
CIL_0002HQ CIL_0002HQ_0001 CGP 11:126262919-126278131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060790 foxred1 FAD-dependent oxidoreductase domain containing 1 protein_coding Danio_rerio
ENSMUSG00000039048 Foxred1 FAD-dependent oxidoreductase domain containing 1 protein_coding Mus_musculus

Loading