C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: FAD-dependent oxidoreductase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263578 FOXRED1-002 ENSG00000110074 9606 + 11:126269133-126278124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENST00000263578
Transcript ID Brain Placenta
ENST00000263578 7.557±0.00 22.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423
CIL_00050Z CIL_00050Z_0002 CGP 11:126211414-126269144
CIL_0002HQ CIL_0002HQ_0001 CGP 11:126262919-126278131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127996 Foxred1-001 protein_coding Mus_musculus 0 1306
ENSMUST00000151658 Foxred1-003 nonsense_mediated_decay Mus_musculus 0 1284
ENSMUST00000043805 Foxred1-002 protein_coding Mus_musculus 0 1234
ENSMUST00000154691 Foxred1-007 nonsense_mediated_decay Mus_musculus 0 1186
ENSMUST00000143039 Foxred1-004 retained_intron Mus_musculus 0 1074
ENSMUST00000130072 Foxred1-005 retained_intron Mus_musculus 0 778
ENSMUST00000151082 Foxred1-006 retained_intron Mus_musculus 0 673
ENSMUST00000140177 Foxred1-012 retained_intron Mus_musculus 0 281

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