C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 141
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110315 RNF141 9606 - 11:10511678-10541230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265981 RNF141-001 10511678-10541217 protein_coding
  ENST00000528665 RNF141-002 10518318-10541190 protein_coding
  ENST00000530156 RNF141-004 10525192-10541230 nonsense_mediated_decay
  ENST00000533412 RNF141-005 10519034-10540906 protein_coding
  ENST00000534281 RNF141-003 10511923-10517740 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265981ENST00000528665ENST00000530156ENST00000533412ENST00000534281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265981 4.384±0.00 6.250±0.00 0.972±0.00 18.768±6.93 8.520±6.00 2.811±0.39 1.645±0.06 4.875±2.91 3.496±1.00 5.348±1.06 4.129±0.77 3.833±0.67 2.737±0.55 10.737±1.61
ENST00000528665 N/A N/A N/A N/A N/A 1.747±0.00 N/A N/A N/A N/A N/A 1.737±0.00 N/A N/A
ENST00000530156 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.524±0.00 N/A N/A N/A 20.399±0.00
ENST00000533412 N/A N/A N/A N/A N/A 3.683±0.00 3.620±0.00 N/A N/A N/A N/A 5.471±0.00 3.405±0.00 38.881±6.37
ENST00000534281 N/A N/A 0.791±0.00 N/A 0.843±0.00 0.743±0.00 N/A 0.774±0.00 N/A 0.820±0.00 0.482±0.00 0.559±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J9 CIL_0004J9_0001 CGP 11:10511678-10611689

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041802 rnf141 ring finger protein 141 protein_coding Danio_rerio
ENSMUSG00000030788 Rnf141 ring finger protein 141 protein_coding Mus_musculus

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