C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 141
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030788 Rnf141 10090 - 7:110800432-110844457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106682 Rnf141-007 110816671-110844126 protein_coding
  ENSMUST00000148367 Rnf141-010 110800432-110801599 retained_intron
  ENSMUST00000175648 Rnf141-009 110816456-110821283 protein_coding
  ENSMUST00000175981 Rnf141-003 110815146-110837529 protein_coding
  ENSMUST00000176048 Rnf141-008 110816592-110821608 retained_intron
  ENSMUST00000176210 Rnf141-011 110800614-110821337 nonsense_mediated_decay
  ENSMUST00000176716 Rnf141-004 110830653-110844402 processed_transcript
  ENSMUST00000176746 Rnf141-005 110825297-110844444 protein_coding
  ENSMUST00000177236 Rnf141-001 110813531-110844457 protein_coding
  ENSMUST00000177462 Rnf141-012 110815583-110844350 protein_coding
  ENSMUST00000177520 Rnf141-006 110833762-110844157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106682ENSMUST00000175648ENSMUST00000175981ENSMUST00000177236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.120±5.50
ENSMUST00000175648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.917±0.00
ENSMUST00000175981 N/A N/A N/A 3.434±0.00 N/A N/A N/A N/A 4.992±0.88 13.493±0.47 N/A 2.753±0.00 N/A 5.084±0.51
ENSMUST00000177236 13.882±1.56 9.636±3.51 10.451±0.64 5.379±1.37 9.060±0.97 9.266±0.72 5.593±0.52 5.980±0.51 9.460±3.05 18.844±3.51 5.188±0.38 6.604±2.84 6.174±4.83 5.208±2.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JA CIL_0004JA_0002 CGP 7:110627661-110812405
CIL_0004J9 CIL_0004J9_0002 CGP 7:110800432-110862953

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0051865 IEA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041802 rnf141 ring finger protein 141 protein_coding Danio_rerio
ENSG00000110315 RNF141 ring finger protein 141 protein_coding Homo_sapiens

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