C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110786 PTPN5 9606 - 11:18727928-18792721 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358540 PTPN5-001 18727928-18791842 protein_coding
  ENST00000396166 PTPN5-005 18727930-18730744 protein_coding
  ENST00000396168 PTPN5-006 18727932-18791640 protein_coding
  ENST00000396170 PTPN5-002 18727930-18792721 protein_coding
  ENST00000477854 PTPN5-004 18727928-18743842 protein_coding
  ENST00000496201 PTPN5-007 18740768-18744343 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000358540ENST00000396166ENST00000396168ENST00000396170ENST00000477854ENST00000496201
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000358540 0.342±0.00 N/A 7.174±0.30 N/A 0.337±0.00 1.099±0.00 0.144±0.00 0.161±0.00 0.263±0.00 0.189±0.13 N/A 0.973±0.54
ENST00000396166 N/A N/A 4.569±0.00 N/A N/A 0.265±0.02 0.132±0.00 N/A 0.130±0.00 0.239±0.26 0.030±0.00 0.161±0.00
ENST00000396168 0.136±0.00 1.237±0.00 10.023±7.23 N/A N/A 0.481±0.06 N/A N/A N/A 0.875±0.00 0.046±0.00 0.880±0.66
ENST00000396170 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477854 N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496201 N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000368 CIL_000368_0001 CGP 11:18727928-18939507

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001784 IDA phosphotyrosine binding
GO:0004725 TAS:IEA protein tyrosine phosphatase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006470 TAS:IEA protein dephosphorylation
GO:0016021 TAS integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074866 ptpn5 protein tyrosine phosphatase, non-receptor type 5 protein_coding Danio_rerio
ENSMUSG00000030854 Ptpn5 protein tyrosine phosphatase, non-receptor type 5 protein_coding Mus_musculus

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