C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000368_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110786-ENSG00000170255 CGP 9606 11:18727928-18939507
GeneTranscriptPositionBiotype
ENSG00000110786 (PTPN5)
protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) 		ENST00000358540 (PTPN5-001) 18727928-18791842 protein_coding
ENST00000396166 (PTPN5-005) 18727930-18730744 protein_coding
ENST00000396168 (PTPN5-006) 18727932-18791640 protein_coding
ENST00000396170 (PTPN5-002) 18727930-18792721 protein_coding
ENST00000477854 (PTPN5-004) 18727928-18743842 protein_coding
ENST00000496201 (PTPN5-007) 18740768-18744343 processed_transcript
ENSG00000254529 (RP11-583F24.7)
 ENST00000524957 (RP11-583F24.7-001) 18863558-18864509 unprocessed_pseudogene
ENSG00000254966 (RP11-1081L13.4)
 ENST00000527285 (RP11-1081L13.4-001) 18706537-18740568 antisense
ENSG00000255244 (RP11-583F24.8)
 ENST00000528646 (RP11-583F24.8-001) 18934985-18939721 antisense
ENSG00000255511 (RP11-1081L13.3)
 ENST00000525272 (RP11-1081L13.3-001) 18870989-18873462 processed_pseudogene
ENSG00000255536 (RP11-583F24.5)
 ENST00000532712 (RP11-583F24.5-001) 18910436-18911396 unprocessed_pseudogene
ENSG00000276789 (RP11-1081L13.5)
 ENST00000611319 (RP11-1081L13.5-001) 18836304-18837081 processed_pseudogene
CIL_000368_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030854-ENSMUSG00000052303 CGP 10090 7:47077798-47204920
GeneTranscriptPositionBiotype
ENSMUSG00000030854 (Ptpn5)
protein tyrosine phosphatase, non-receptor type 5 		ENSMUST00000033142 (Ptpn5-001) 47077798-47132717 protein_coding
ENSMUST00000102626 (Ptpn5-002) 47077802-47133684 protein_coding
ENSMUST00000107617 (Ptpn5-003) 47082454-47133437 protein_coding
ENSMUST00000126370 (Ptpn5-004) 47077798-47132326 retained_intron
ENSMUST00000128358 (Ptpn5-011) 47081662-47088568 retained_intron
ENSMUST00000130381 (Ptpn5-007) 47132708-47133576 processed_transcript
ENSMUST00000137722 (Ptpn5-006) 47112737-47133577 processed_transcript
ENSMUST00000139057 (Ptpn5-010) 47090771-47112703 processed_transcript
ENSMUST00000145321 (Ptpn5-009) 47112747-47113471 retained_intron
ENSMUST00000149785 (Ptpn5-008) 47112719-47133416 processed_transcript
ENSMUST00000153192 (Ptpn5-005) 47081425-47091336 retained_intron
ENSMUSG00000052303 (Mrgpra6)
MAS-related GPR, member A6 		ENSMUST00000073793 (Mrgpra6-201) 47185717-47189416 protein_coding
ENSMUST00000186456 (Mrgpra6-001) 47185707-47204920 protein_coding
ENSMUSG00000085186 (Gm14377)
predicted gene 14377 		ENSMUST00000149742 (Gm14377-001) 47110851-47125990 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000368_0001ENSG00000110786ENST00000358540ENST00000396166ENST00000396168ENST00000396170ENST00000477854ENST00000496201ENSG00000254529ENST00000524957ENSG00000254966ENST00000527285ENSG00000255244ENST00000528646ENSG00000255511ENST00000525272ENSG00000255536ENST00000532712ENSG00000276789ENST00000611319CIL_000368_0002ENSMUSG00000030854ENSMUST00000033142ENSMUST00000102626ENSMUST00000107617ENSMUST00000126370ENSMUST00000128358ENSMUST00000130381ENSMUST00000137722ENSMUST00000139057ENSMUST00000145321ENSMUST00000149785ENSMUST00000153192ENSMUSG00000052303ENSMUST00000073793ENSMUST00000186456ENSMUSG00000085186ENSMUST00000149742
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000368_0001ENSG00000110786ENST00000358540ENST00000396166ENST00000396168ENST00000396170ENST00000477854ENST00000496201ENSG00000254529ENST00000524957ENSG00000254966ENST00000527285ENSG00000255244ENST00000528646ENSG00000255511ENST00000525272ENSG00000255536ENST00000532712ENSG00000276789ENST00000611319CIL_000368_0002ENSMUSG00000030854ENSMUST00000033142ENSMUST00000102626ENSMUST00000107617ENSMUST00000126370ENSMUST00000128358ENSMUST00000137722ENSMUST00000139057ENSMUST00000149785ENSMUST00000153192ENSMUSG00000052303ENSMUST00000073793ENSMUST00000186456ENSMUSG00000085186ENSMUST00000149742
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110786 ENST00000358540 0.342±0.00 N/A N/A 7.174±0.30 N/A 0.337±0.00 1.099±0.00 0.144±0.00 0.161±0.00 0.263±0.00 N/A 0.189±0.13 N/A 0.973±0.54
ENST00000396166 N/A N/A N/A 4.569±0.00 N/A N/A 0.265±0.02 0.132±0.00 N/A 0.130±0.00 N/A 0.239±0.26 0.030±0.00 0.161±0.00
ENST00000396168 0.136±0.00 1.237±0.00 N/A 10.023±7.23 N/A N/A 0.481±0.06 N/A N/A N/A N/A 0.875±0.00 0.046±0.00 0.880±0.66
ENST00000396170 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477854 N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496201 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A
ENSG00000254529 ENST00000524957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 0.035±0.00
ENSG00000254966 ENST00000527285 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.862±0.00 N/A N/A N/A N/A
ENSG00000255244 ENST00000528646 0.057±0.00 N/A N/A 0.041±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.00
ENSG00000255511 ENST00000525272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00
ENSG00000255536 ENST00000532712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSG00000276789 ENST00000611319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030854 ENSMUST00000033142 5.682±0.07 0.095±0.03 0.056±0.03 37.723±12.51 3.678±1.27 0.268±0.08 N/A 0.190±0.07 0.026±0.03 0.261±0.16 0.018±0.00 4.707±2.54 0.233±0.46 0.006±0.00
ENSMUST00000102626 0.736±0.47 0.062±0.04 0.021±0.00 N/A 0.619±0.00 0.169±0.10 0.034±0.00 0.132±0.05 0.027±0.03 0.130±0.03 N/A 0.450±0.23 0.007±0.00 0.020±0.01
ENSMUST00000107617 N/A 0.037±0.01 N/A N/A N/A 0.069±0.00 0.064±0.00 N/A 0.010±0.01 N/A N/A N/A N/A 0.030±0.00
ENSMUST00000126370 1.244±0.75 N/A N/A N/A 0.610±0.23 0.109±0.04 N/A 0.070±0.00 N/A 0.181±0.01 N/A 0.883±0.73 N/A N/A
ENSMUST00000128358 N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 N/A 0.390±0.00 N/A N/A 0.070±0.00 0.100±0.04
ENSMUST00000130381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137722 N/A 0.101±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139057 N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149785 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 0.020±0.00 0.024±0.00
ENSMUSG00000052303 ENSMUST00000073793 N/A N/A N/A N/A N/A N/A 0.067±0.04 N/A N/A 0.051±0.00 N/A 0.041±0.00 N/A 0.069±0.00
ENSMUST00000186456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A 0.150±0.00
ENSMUSG00000085186 ENSMUST00000149742 0.253±0.05 N/A 0.009±0.00 0.270±0.18 0.144±0.02 N/A N/A 0.023±0.01 0.005±0.00 0.021±0.00 N/A 0.219±0.12 0.014±0.00 0.011±0.01

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