C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396168 PTPN5-006 ENSG00000110786 9606 - 11:18727932-18791640 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartOvaryPlacentaTestisENST00000396168
Transcript ID Adipose Adrenal Brain Heart Ovary Placenta Testis
ENST00000396168 0.136±0.00 1.237±0.00 10.023±7.23 0.481±0.06 0.875±0.00 0.046±0.00 0.880±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000368 CIL_000368_0001 CGP 11:18727928-18939507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001784 IDA phosphotyrosine binding
GO:0004725 TAS:IEA protein tyrosine phosphatase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006470 TAS:IEA protein dephosphorylation
GO:0016021 TAS integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033142 Ptpn5-001 protein_coding Mus_musculus 0 2309
ENSMUST00000102626 Ptpn5-002 protein_coding Mus_musculus 0 2207
ENSMUST00000126370 Ptpn5-004 retained_intron Mus_musculus 0 1901
ENSMUST00000107617 Ptpn5-003 protein_coding Mus_musculus 0 1225
ENSMUST00000153192 Ptpn5-005 retained_intron Mus_musculus 0 918
ENSMUST00000128358 Ptpn5-011 retained_intron Mus_musculus 0 680
ENSDART00000114774 ptpn5-201 protein_coding Danio_rerio 0 285
ENSMUST00000139057 Ptpn5-010 processed_transcript Mus_musculus 0 268
ENSMUST00000137722 Ptpn5-006 processed_transcript Mus_musculus 0 193
ENSMUST00000167080 Ptpn7-004 protein_coding Mus_musculus 2e-24 119
ENSMUST00000049449 Ptpn7-001 protein_coding Mus_musculus 2e-24 119
ENSMUST00000187985 Ptpn7-002 protein_coding Mus_musculus 2e-24 119

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