C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030854 Ptpn5 10090 - 7:47077798-47133684 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033142 Ptpn5-001 47077798-47132717 protein_coding
  ENSMUST00000102626 Ptpn5-002 47077802-47133684 protein_coding
  ENSMUST00000107617 Ptpn5-003 47082454-47133437 protein_coding
  ENSMUST00000126370 Ptpn5-004 47077798-47132326 retained_intron
  ENSMUST00000128358 Ptpn5-011 47081662-47088568 retained_intron
  ENSMUST00000130381 Ptpn5-007 47132708-47133576 processed_transcript
  ENSMUST00000137722 Ptpn5-006 47112737-47133577 processed_transcript
  ENSMUST00000139057 Ptpn5-010 47090771-47112703 processed_transcript
  ENSMUST00000145321 Ptpn5-009 47112747-47113471 retained_intron
  ENSMUST00000149785 Ptpn5-008 47112719-47133416 processed_transcript
  ENSMUST00000153192 Ptpn5-005 47081425-47091336 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033142ENSMUST00000102626ENSMUST00000107617ENSMUST00000126370ENSMUST00000128358ENSMUST00000137722ENSMUST00000139057ENSMUST00000149785ENSMUST00000153192
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033142 5.682±0.07 0.095±0.03 0.056±0.03 37.723±12.51 3.678±1.27 0.268±0.08 N/A 0.190±0.07 0.026±0.03 0.261±0.16 0.018±0.00 4.707±2.54 0.233±0.46 0.006±0.00
ENSMUST00000102626 0.736±0.47 0.062±0.04 0.021±0.00 N/A 0.619±0.00 0.169±0.10 0.034±0.00 0.132±0.05 0.027±0.03 0.130±0.03 N/A 0.450±0.23 0.007±0.00 0.020±0.01
ENSMUST00000107617 N/A 0.037±0.01 N/A N/A N/A 0.069±0.00 0.064±0.00 N/A 0.010±0.01 N/A N/A N/A N/A 0.030±0.00
ENSMUST00000126370 1.244±0.75 N/A N/A N/A 0.610±0.23 0.109±0.04 N/A 0.070±0.00 N/A 0.181±0.01 N/A 0.883±0.73 N/A N/A
ENSMUST00000128358 N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 N/A 0.390±0.00 N/A N/A 0.070±0.00 0.100±0.04
ENSMUST00000137722 N/A 0.101±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139057 N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149785 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 0.020±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000368 CIL_000368_0002 CGP 7:47077798-47204920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001784 IEA phosphotyrosine binding
GO:0004725 IMP protein tyrosine phosphatase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006470 IMP protein dephosphorylation
GO:0016021 IEA integral component of membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074866 ptpn5 protein tyrosine phosphatase, non-receptor type 5 protein_coding Danio_rerio
ENSG00000110786 PTPN5 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) protein_coding Homo_sapiens

Loading