C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 2 associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618072 CDK2AP1-201 ENSG00000111328 9606 - 12:123260971-123268254 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000618072
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000618072 22.170±0.00 6.890±0.00 1.222±0.00 7.836±0.00 10.246±0.00 6.983±0.00 3.897±0.00 15.048±9.62 24.232±4.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0003J7 CIL_0003J7_0001 CGP 12:123232916-123272334
CIL_0003J6 CIL_0003J6_0001 CGP 12:123260971-123364843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 IDA positive regulation of protein phosphorylation
GO:0005634 IDA nucleus
GO:0006261 NAS DNA-dependent DNA replication
GO:0007049 IEA cell cycle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070182 IPI DNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031341 Cdk2ap1-001 protein_coding Mus_musculus 0 196
ENSMUST00000104959 Gm12184-001 protein_coding Mus_musculus 3.99931e-42 176

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