C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytidine monophosphate N-acetylneuraminic acid synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111726 CMAS 9606 + 12:22046174-22065674 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229329 CMAS-001 22046174-22065663 protein_coding
  ENST00000534981 CMAS-002 22046225-22065674 nonsense_mediated_decay
  ENST00000535610 CMAS-006 22046287-22062434 nonsense_mediated_decay
  ENST00000537658 CMAS-004 22060642-22062413 retained_intron
  ENST00000538498 CMAS-003 22055119-22060906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229329ENST00000534981ENST00000535610ENST00000537658ENST00000538498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229329 8.604±0.00 13.417±0.00 1.430±0.00 22.748±11.03 5.963±1.39 8.655±6.00 6.569±6.01 8.513±5.35 7.363±6.58 5.672±4.61 2.266±2.17 14.598±6.81 17.268±3.16 34.921±5.39
ENST00000534981 N/A N/A N/A 2.932±0.00 1.105±0.00 1.859±0.00 N/A 2.683±0.00 0.539±0.00 N/A N/A 2.055±0.00 N/A N/A
ENST00000535610 3.792±0.00 N/A N/A N/A 4.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00 N/A N/A 15.710±0.00
ENST00000538498 N/A N/A N/A N/A N/A 5.360±0.00 N/A 10.081±0.00 N/A 6.022±0.00 3.327±0.00 11.117±0.00 N/A 16.920±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PR CIL_0005PR_0001 CGP 12:21797401-22065674

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0006054 IEA N-acetylneuraminate metabolic process
GO:0008781 IEA N-acylneuraminate cytidylyltransferase activity
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057334 cmasa cytidine monophosphate N-acetylneuraminic acid synthetase a protein_coding Danio_rerio
ENSDARG00000089903 cmasb cytidine monophosphate N-acetylneuraminic acid synthetase b protein_coding Danio_rerio
ENSDARG00000091267 CMAS (3 of 3) cytidine monophosphate N-acetylneuraminic acid synthetase protein_coding Danio_rerio
ENSMUSG00000030282 Cmas cytidine monophospho-N-acetylneuraminic acid synthetase protein_coding Mus_musculus

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