C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytidine monophosphate N-acetylneuraminic acid synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534981 CMAS-002 ENSG00000111726 9606 + 12:22046225-22065674 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryENST00000534981
Transcript ID Brain Breast Colon Kidney Liver Ovary
ENST00000534981 2.932±0.00 1.105±0.00 1.859±0.00 2.683±0.00 0.539±0.00 2.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PR CIL_0005PR_0001 CGP 12:21797401-22065674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0006054 IEA N-acetylneuraminate metabolic process
GO:0008781 IEA N-acylneuraminate cytidylyltransferase activity
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032419 Cmas-001 protein_coding Mus_musculus 0 985
ENSMUST00000133248 Cmas-002 processed_transcript Mus_musculus 0 486
ENSMUST00000144920 Cmas-003 retained_intron Mus_musculus 0 213

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