C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000069431-ENSG00000111726 CGP 9606 12:21797401-22065674
GeneTranscriptPositionBiotype
ENSG00000069431 (ABCC9)
ATP-binding cassette, sub-family C (CFTR/MRP), member 9 		ENST00000261200 (ABCC9-001) 21797401-21936674 protein_coding
ENST00000261201 (ABCC9-002) 21805174-21936674 protein_coding
ENST00000326684 (ABCC9-005) 21922969-21941402 protein_coding
ENST00000538350 (ABCC9-004) 21923464-21941233 protein_coding
ENST00000544039 (ABCC9-003) 21805174-21910978 protein_coding
ENST00000621589 (ABCC9-201) 21923813-21936674 protein_coding
ENSG00000111726 (CMAS)
cytidine monophosphate N-acetylneuraminic acid synthetase 		ENST00000229329 (CMAS-001) 22046174-22065663 protein_coding
ENST00000534981 (CMAS-002) 22046225-22065674 nonsense_mediated_decay
ENST00000535610 (CMAS-006) 22046287-22062434 nonsense_mediated_decay
ENST00000537658 (CMAS-004) 22060642-22062413 retained_intron
ENST00000538498 (CMAS-003) 22055119-22060906 protein_coding
ENSG00000111728 (ST8SIA1)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 		ENST00000261197 (ST8SIA1-007) 22200999-22334714 nonsense_mediated_decay
ENST00000381424 (ST8SIA1-003) 22325099-22334671 protein_coding
ENST00000396037 (ST8SIA1-001) 22193391-22334714 protein_coding
ENST00000404299 (ST8SIA1-002) 22324379-22334700 protein_coding
ENST00000508924 (ST8SIA1-009) 22201661-22268605 processed_transcript
ENST00000536535 (ST8SIA1-015) 22063773-22070613 processed_transcript
ENST00000536558 (ST8SIA1-004) 22324412-22437041 processed_transcript
ENST00000537795 (ST8SIA1-014) 22107159-22118489 processed_transcript
ENST00000538256 (ST8SIA1-012) 22223272-22249046 protein_coding
ENST00000540824 (ST8SIA1-006) 22201904-22336200 protein_coding
ENST00000541868 (ST8SIA1-011) 22248826-22334163 protein_coding
ENST00000544732 (ST8SIA1-010) 22066419-22250787 processed_transcript
ENST00000545185 (ST8SIA1-005) 22354203-22376943 processed_transcript
ENST00000545494 (ST8SIA1-008) 22201468-22268613 processed_transcript
ENST00000545524 (ST8SIA1-013) 22107275-22287194 processed_transcript
ENSG00000275567 (RP11-729I10.3)
 ENST00000615261 (RP11-729I10.3-001) 21828360-21828564 sense_intronic
CIL_0005PR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030249-ENSMUSG00000030282 CGP 10090 6:142587862-142775714
GeneTranscriptPositionBiotype
ENSMUSG00000030249 (Abcc9)
ATP-binding cassette, sub-family C (CFTR/MRP), member 9 		ENSMUST00000073173 (Abcc9-201) 142587862-142702274 protein_coding
ENSMUST00000087527 (Abcc9-202) 142587862-142702274 protein_coding
ENSMUST00000100827 (Abcc9-203) 142587862-142702274 protein_coding
ENSMUST00000111771 (Abcc9-204) 142587862-142702274 protein_coding
ENSMUSG00000030282 (Cmas)
cytidine monophospho-N-acetylneuraminic acid synthetase 		ENSMUST00000032419 (Cmas-001) 142756686-142775714 protein_coding
ENSMUST00000133248 (Cmas-002) 142756754-142770590 processed_transcript
ENSMUST00000144920 (Cmas-003) 142756764-142772734 retained_intron
ENSMUST00000146643 (Cmas-004) 142769966-142771334 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PR_0001ENSG00000069431ENST00000261200ENST00000261201ENST00000326684ENST00000538350ENST00000544039ENST00000621589ENSG00000111726ENST00000229329ENST00000534981ENST00000535610ENST00000537658ENST00000538498ENSG00000111728ENST00000261197ENST00000381424ENST00000396037ENST00000404299ENST00000508924ENST00000536535ENST00000536558ENST00000537795ENST00000538256ENST00000540824ENST00000541868ENST00000544732ENST00000545185ENST00000545494ENST00000545524ENSG00000275567ENST00000615261CIL_0005PR_0002ENSMUSG00000030249ENSMUST00000073173ENSMUST00000087527ENSMUST00000100827ENSMUST00000111771ENSMUSG00000030282ENSMUST00000032419ENSMUST00000133248ENSMUST00000144920ENSMUST00000146643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PR_0001ENSG00000069431ENST00000261200ENST00000261201ENST00000544039ENSG00000111726ENST00000229329ENST00000534981ENST00000535610ENST00000537658ENST00000538498ENSG00000111728ENST00000261197ENST00000396037ENST00000536558ENST00000540824ENST00000541868ENST00000545185ENST00000545494ENSG00000275567ENST00000615261CIL_0005PR_0002ENSMUSG00000030249ENSMUST00000073173ENSMUST00000087527ENSMUST00000100827ENSMUST00000111771ENSMUSG00000030282ENSMUST00000032419ENSMUST00000133248
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000069431 ENST00000261200 N/A 2.961±0.00 N/A 1.256±0.00 1.905±0.06 3.108±0.18 5.148±0.00 6.296±5.61 1.857±0.32 3.001±0.89 8.144±0.00 1.175±0.29 0.599±0.19 1.078±0.00
ENST00000261201 N/A N/A 1.245±0.00 N/A N/A N/A 4.993±0.63 N/A N/A N/A 7.395±0.00 1.079±0.00 N/A N/A
ENST00000326684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544039 8.027±0.00 N/A N/A 2.153±0.00 2.554±0.00 2.362±0.00 5.530±0.00 11.513±0.00 N/A N/A 5.076±2.83 1.526±0.00 0.283±0.00 N/A
ENST00000621589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000111726 ENST00000229329 8.604±0.00 13.417±0.00 1.430±0.00 22.748±11.03 5.963±1.39 8.655±6.00 6.569±6.01 8.513±5.35 7.363±6.58 5.672±4.61 2.266±2.17 14.598±6.81 17.268±3.16 34.921±5.39
ENST00000534981 N/A N/A N/A 2.932±0.00 1.105±0.00 1.859±0.00 N/A 2.683±0.00 0.539±0.00 N/A N/A 2.055±0.00 N/A N/A
ENST00000535610 3.792±0.00 N/A N/A N/A 4.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00 N/A N/A 15.710±0.00
ENST00000538498 N/A N/A N/A N/A N/A 5.360±0.00 N/A 10.081±0.00 N/A 6.022±0.00 3.327±0.00 11.117±0.00 N/A 16.920±0.00
ENSG00000111728 ENST00000261197 N/A 1.495±0.00 N/A 3.717±0.00 1.036±0.00 1.101±0.65 0.286±0.05 0.185±0.00 0.849±0.83 2.100±1.74 0.088±0.00 0.694±0.50 0.219±0.08 1.201±0.06
ENST00000381424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396037 N/A 0.335±0.00 0.026±0.00 1.176±0.00 0.202±0.00 0.385±0.00 0.062±0.00 0.062±0.00 0.014±0.00 0.206±0.09 N/A 0.197±0.00 0.034±0.00 0.051±0.00
ENST00000404299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536558 0.034±0.00 N/A 0.028±0.00 N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A
ENST00000537795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.559±0.00 N/A
ENST00000541868 N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A 1.004±0.00 N/A N/A N/A
ENST00000544732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.063±0.00
ENST00000545494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A
ENST00000545524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275567 ENST00000615261 0.877±0.00 0.368±0.00 N/A 0.239±0.00 N/A N/A 0.056±0.00 N/A 0.846±0.22 0.354±0.00 16.255±0.00 0.389±0.13 N/A 0.277±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030249 ENSMUST00000073173 N/A N/A N/A N/A 4.198±0.37 N/A 4.179±0.00 N/A N/A 0.923±0.00 N/A N/A N/A N/A
ENSMUST00000087527 N/A N/A N/A N/A 1.332±0.00 N/A 21.028±1.73 N/A N/A 0.335±0.00 5.489±0.86 N/A 0.112±0.00 N/A
ENSMUST00000100827 7.546±1.82 2.263±0.55 7.743±0.46 1.696±0.81 3.938±0.88 3.217±0.66 11.137±0.90 1.975±0.36 1.549±0.43 2.373±0.15 3.635±0.00 4.207±1.85 0.240±0.09 0.194±0.10
ENSMUST00000111771 N/A N/A 1.472±0.00 N/A 2.906±0.06 N/A N/A 0.414±0.00 N/A N/A 27.241±1.86 N/A N/A N/A
ENSMUSG00000030282 ENSMUST00000032419 6.538±0.25 2.706±0.53 22.445±2.84 34.277±13.56 3.854±0.52 39.528±2.95 8.277±0.54 10.468±1.72 40.126±32.95 6.725±0.98 11.684±0.55 10.970±8.49 57.020±26.16 11.337±2.99
ENSMUST00000133248 5.872±0.09 6.805±7.11 N/A N/A 4.940±0.59 83.965±19.88 N/A 3.192±0.00 5.780±1.26 3.482±0.00 N/A 12.684±5.55 N/A N/A
ENSMUST00000144920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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