C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytidine monophosphate N-acetylneuraminic acid synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000229329 CMAS-001 ENSG00000111726 9606 + 12:22046174-22065663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229329 8.604±0.00 13.417±0.00 1.430±0.00 22.748±11.03 5.963±1.39 8.655±6.00 6.569±6.01 8.513±5.35 7.363±6.58 5.672±4.61 2.266±2.17 14.598±6.81 17.268±3.16 34.921±5.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PR CIL_0005PR_0001 CGP 12:21797401-22065674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0006054 IEA N-acetylneuraminate metabolic process
GO:0008781 IEA N-acylneuraminate cytidylyltransferase activity
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032419 Cmas-001 protein_coding Mus_musculus 0 1563
ENSMUST00000144920 Cmas-003 retained_intron Mus_musculus 0 501
ENSMUST00000133248 Cmas-002 processed_transcript Mus_musculus 0 486
ENSMUST00000146643 Cmas-004 retained_intron Mus_musculus 0 366

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