C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: minichromosome maintenance complex component 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112118 MCM3 9606 - 6:52264009-52284881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229854 MCM3-006 52264009-52284751 protein_coding
  ENST00000419835 MCM3-201 52264014-52284881 protein_coding
  ENST00000421471 MCM3-004 52264621-52273775 protein_coding
  ENST00000476448 MCM3-003 52275982-52279452 processed_transcript
  ENST00000596288 MCM3-001 52264009-52284837 protein_coding
  ENST00000596983 MCM3-005 52282111-52284881 nonsense_mediated_decay
  ENST00000616552 MCM3-202 52264014-52284881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229854ENST00000419835ENST00000421471ENST00000476448ENST00000596288ENST00000616552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229854 8.718±0.00 15.667±0.00 2.564±0.00 4.088±2.05 6.330±0.71 5.719±1.12 3.822±3.12 6.811±3.60 3.081±1.25 6.044±3.89 3.260±0.00 24.675±15.90 28.532±5.32 14.937±3.20
ENST00000419835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A
ENST00000421471 N/A N/A N/A N/A N/A 4.339±0.00 N/A N/A N/A N/A N/A 41.852±0.00 26.832±0.00 10.851±0.00
ENST00000476448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.064±0.00 N/A N/A N/A
ENST00000596288 3.099±0.00 N/A N/A N/A 3.863±0.00 2.047±0.50 N/A 3.954±0.00 3.963±0.00 2.908±0.00 N/A 3.133±0.00 N/A 2.971±0.00
ENST00000616552 N/A N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A 14.791±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0001 VISTA 6:52088930-52691414
CIL_0005N2 CIL_0005N2_0001 CGP 6:52236681-52284881
CIL_0002I8 CIL_0002I8_0002 CGP 6:52264009-52407777

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005658 TAS alpha DNA polymerase:primase complex
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0006260 TAS:IEA DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016020 IDA membrane
GO:0016851 IEA magnesium chelatase activity
GO:0032508 IEA DNA duplex unwinding
GO:0042555 IDA MCM complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024204 mcm3 MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) protein_coding Danio_rerio
ENSDARG00000090802 mcm3 MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000041859 Mcm3 minichromosome maintenance deficient 3 (S. cerevisiae) protein_coding Mus_musculus

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