C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596288 MCM3-001 ENSG00000112118 9606 - 6:52264009-52284837 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungOvaryTestisENST00000596288
Transcript ID Adipose Breast Colon Kidney Liver Lung Ovary Testis
ENST00000596288 3.099±0.00 3.863±0.00 2.047±0.50 3.954±0.00 3.963±0.00 2.908±0.00 3.133±0.00 2.971±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0001 VISTA 6:52088930-52691414
CIL_0005N2 CIL_0005N2_0001 CGP 6:52236681-52284881
CIL_0002I8 CIL_0002I8_0002 CGP 6:52264009-52407777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005658 TAS alpha DNA polymerase:primase complex
GO:0005813 IDA centrosome
GO:0006260 TAS:IEA DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016020 IDA membrane
GO:0016851 IEA magnesium chelatase activity
GO:0032508 IEA DNA duplex unwinding
GO:0042555 IEA:IDA MCM complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053266 Mcm3-001 protein_coding Mus_musculus 0 2811
ENSMUST00000185296 Mcm3-002 retained_intron Mus_musculus 0 2615
ENSDART00000018304 mcm3-001 protein_coding Danio_rerio 0 1044
ENSMUST00000190421 Mcm3-004 retained_intron Mus_musculus 6e-25 119

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