C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase type IVA, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112245 PTP4A1 9606 + 6:63521761-63583587 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370651 PTP4A1-004 63572012-63583587 protein_coding
  ENST00000470661 PTP4A1-002 63521761-63576582 processed_transcript
  ENST00000473334 PTP4A1-003 63573238-63576697 processed_transcript
  ENST00000578299 PTP4A1-005 63572681-63576531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370651
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370651 9.176±0.00 8.931±0.00 1.362±0.00 12.162±5.94 15.815±0.09 17.201±3.72 3.377±0.25 31.593±12.61 27.692±9.44 19.677±1.08 29.840±14.31 19.756±3.38 10.036±5.99 10.159±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000620 CIL_000620_0002 CGP 6:63275951-63583587

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 NAS:IEA protein tyrosine phosphatase activity
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005856 IEA cytoskeleton
GO:0006470 IEA protein dephosphorylation
GO:0007049 IEA cell cycle
GO:0007275 IEA multicellular organismal development
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030335 IEA positive regulation of cell migration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006242 ptp4a1 protein tyrosine phosphatase type IVA, member 1 protein_coding Danio_rerio
ENSMUSG00000026064 Ptp4a1 protein tyrosine phosphatase 4a1 protein_coding Mus_musculus

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