C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sine oculis binding protein homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112320 SOBP 9606 + 6:107489958-107660167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317357 SOBP-001 107489958-107660167 protein_coding
  ENST00000477448 SOBP-002 107490106-107558287 retained_intron
  ENST00000494935 SOBP-003 107634990-107636316 processed_transcript
  ENST00000618129 SOBP-201 107490604-107515073 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317357ENST00000477448ENST00000618129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317357 4.115±0.00 2.670±0.00 N/A 10.904±6.96 3.377±2.55 12.884±0.00 4.518±3.81 1.737±1.54 0.785±0.09 3.045±0.00 7.204±4.97 5.286±5.00 1.530±0.20 7.569±3.78
ENST00000477448 N/A N/A 0.431±0.00 N/A 0.665±0.00 0.795±0.00 1.163±0.00 0.822±0.00 N/A 0.916±0.00 N/A 3.241±0.00 N/A N/A
ENST00000618129 N/A N/A N/A N/A 0.776±0.00 0.385±0.00 N/A N/A 1.583±0.00 0.451±0.00 N/A 0.339±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OU CIL_0001OU_0002 CGP 6:107152557-107660167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007605 IEA sensory perception of sound
GO:0007626 IEA locomotory behavior
GO:0032184 IDA SUMO polymer binding
GO:0042472 IEA inner ear morphogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017386 sobpb sine oculis binding protein homolog (Drosophila) b protein_coding Danio_rerio
ENSDARG00000054253 sobpa sine oculis binding protein homolog (Drosophila) a protein_coding Danio_rerio
ENSDARG00000093437 SOBP (3 of 3) sine oculis binding protein homolog (Drosophila) protein_coding Danio_rerio
ENSMUSG00000038248 Sobp sine oculis-binding protein homolog (Drosophila) protein_coding Mus_musculus

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