C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012563-ENSDARG00000054253 CGP 7955 13:32884146-33019619
GeneTranscriptPositionBiotype
ENSDARG00000012563 (pdss2)
prenyl (decaprenyl) diphosphate synthase, subunit 2 		ENSDART00000012232 (pdss2-001) 32884146-32949780 protein_coding
ENSDARG00000054253 (sobpa)
sine oculis binding protein homolog (Drosophila) a 		ENSDART00000076423 (sobpa-001) 32964111-33019619 protein_coding
CIL_0001OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164494-ENSG00000112320 CGP 9606 6:107152557-107660167
GeneTranscriptPositionBiotype
ENSG00000112320 (SOBP)
sine oculis binding protein homolog (Drosophila) 		ENST00000317357 (SOBP-001) 107489958-107660167 protein_coding
ENST00000477448 (SOBP-002) 107490106-107558287 retained_intron
ENST00000494935 (SOBP-003) 107634990-107636316 processed_transcript
ENST00000618129 (SOBP-201) 107490604-107515073 protein_coding
ENSG00000164494 (PDSS2)
prenyl (decaprenyl) diphosphate synthase, subunit 2 		ENST00000369031 (PDSS2-002) 107264186-107459564 protein_coding
ENST00000369037 (PDSS2-001) 107152557-107459563 protein_coding
ENST00000449027 (PDSS2-003) 107197841-107212159 protein_coding
ENSG00000220237 (RPS24P12)
ribosomal protein S24 pseudogene 12 		ENST00000402084 (RPS24P12-001) 107229759-107230152 processed_pseudogene
ENSG00000234206 (RP1-67A8.3)
 ENST00000437040 (RP1-67A8.3-002) 107509803-107511721 antisense
ENST00000441532 (RP1-67A8.3-001) 107509803-107511436 antisense
ENSG00000276620 (RP11-300D11.3)
 ENST00000611326 (RP11-300D11.3-001) 107192300-107192573 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OU_0001ENSDARG00000012563ENSDART00000012232ENSDARG00000054253ENSDART00000076423CIL_0001OU_0002ENSG00000112320ENST00000317357ENST00000477448ENST00000494935ENST00000618129ENSG00000164494ENST00000369031ENST00000369037ENST00000449027ENSG00000220237ENST00000402084ENSG00000234206ENST00000437040ENST00000441532ENSG00000276620ENST00000611326
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OU_0001ENSDARG00000012563ENSDART00000012232ENSDARG00000054253ENSDART00000076423CIL_0001OU_0002ENSG00000112320ENST00000317357ENST00000477448ENST00000618129ENSG00000164494ENST00000369031ENST00000369037ENSG00000220237ENST00000402084ENSG00000234206ENST00000437040ENST00000441532ENSG00000276620ENST00000611326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012563 ENSDART00000012232 N/A N/A N/A 2.408±1.27 N/A N/A 5.156±3.40 2.666±2.60 0.911±0.00 N/A 3.450±0.00 N/A N/A N/A
ENSDARG00000054253 ENSDART00000076423 N/A N/A N/A 1.243±1.61 N/A N/A 0.253±0.11 0.259±0.00 0.013±0.00 N/A 0.233±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112320 ENST00000317357 4.115±0.00 2.670±0.00 N/A 10.904±6.96 3.377±2.55 12.884±0.00 4.518±3.81 1.737±1.54 0.785±0.09 3.045±0.00 7.204±4.97 5.286±5.00 1.530±0.20 7.569±3.78
ENST00000477448 N/A N/A 0.431±0.00 N/A 0.665±0.00 0.795±0.00 1.163±0.00 0.822±0.00 N/A 0.916±0.00 N/A 3.241±0.00 N/A N/A
ENST00000494935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618129 N/A N/A N/A N/A 0.776±0.00 0.385±0.00 N/A N/A 1.583±0.00 0.451±0.00 N/A 0.339±0.00 N/A N/A
ENSG00000164494 ENST00000369031 1.037±0.00 1.668±0.00 N/A 0.701±0.00 N/A N/A N/A N/A N/A 0.721±0.00 N/A 3.383±0.41 2.657±0.36 1.355±0.00
ENST00000369037 1.560±0.00 1.339±0.00 0.400±0.00 1.669±0.26 2.880±0.88 2.906±0.13 3.110±1.26 5.382±1.59 4.032±1.96 1.728±0.43 1.055±0.02 3.245±0.37 1.658±0.56 1.590±0.69
ENST00000449027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000220237 ENST00000402084 N/A N/A N/A 0.187±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.276±0.00
ENSG00000234206 ENST00000437040 N/A 0.060±0.00 N/A N/A 0.064±0.00 N/A 0.106±0.00 N/A N/A N/A N/A 0.127±0.00 0.462±0.00 N/A
ENST00000441532 N/A 0.034±0.00 N/A N/A 0.130±0.00 0.092±0.00 0.062±0.00 N/A N/A N/A N/A 0.191±0.11 0.171±0.00 0.276±0.00
ENSG00000276620 ENST00000611326 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A 0.231±0.00 0.053±0.00 N/A N/A N/A

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