C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sine oculis-binding protein homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038248 Sobp 10090 - 10:43002500-43174530 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040275 Sobp-001 43002500-43174530 protein_coding
  ENSMUST00000189987 Sobp-002 43172974-43174521 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040275ENSMUST00000189987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040275 0.561±0.32 1.732±0.23 0.564±0.41 10.017±4.40 0.462±0.14 0.952±0.30 0.995±0.80 0.116±0.04 0.017±0.01 0.401±0.13 7.021±1.82 2.955±0.75 0.178±0.15 0.828±0.10
ENSMUST00000189987 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A 0.047±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0003 UCNEbase 10:42339928-43024116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007605 IMP sensory perception of sound
GO:0007626 IMP locomotory behavior
GO:0032184 ISS SUMO polymer binding
GO:0042472 IMP inner ear morphogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017386 sobpb sine oculis binding protein homolog (Drosophila) b protein_coding Danio_rerio
ENSDARG00000054253 sobpa sine oculis binding protein homolog (Drosophila) a protein_coding Danio_rerio
ENSDARG00000093437 SOBP (3 of 3) sine oculis binding protein homolog (Drosophila) protein_coding Danio_rerio
ENSG00000112320 SOBP sine oculis binding protein homolog (Drosophila) protein_coding Homo_sapiens

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