C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sine oculis binding protein homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317357 SOBP-001 ENSG00000112320 9606 + 6:107489958-107660167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317357
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317357 4.115±0.00 2.670±0.00 10.904±6.96 3.377±2.55 12.884±0.00 4.518±3.81 1.737±1.54 0.785±0.09 3.045±0.00 7.204±4.97 5.286±5.00 1.530±0.20 7.569±3.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OU CIL_0001OU_0002 CGP 6:107152557-107660167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007605 IEA sensory perception of sound
GO:0007626 IEA locomotory behavior
GO:0032184 IDA SUMO polymer binding
GO:0042472 IEA inner ear morphogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040275 Sobp-001 protein_coding Mus_musculus 0 5602
ENSMUST00000189987 Sobp-002 protein_coding Mus_musculus 0 453

Loading