C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-C motif) receptor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112486 CCR6 9606 + 6:167122769-167139696 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341935 CCR6-002 167122769-167139696 protein_coding
  ENST00000349984 CCR6-001 167122771-167138946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLungMuscleENST00000349984
Transcript ID Adrenal Lung Muscle
ENST00000349984 1.538±0.00 0.509±0.00 0.160±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HA CIL_0002HA_0002 CGP 6:166999182-167139141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002407 TAS dendritic cell chemotaxis
GO:0004872 TAS receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0004950 TAS chemokine receptor activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006928 TAS cellular component movement
GO:0006935 TAS chemotaxis
GO:0006955 TAS immune response
GO:0006959 TAS humoral immune response
GO:0006968 TAS cellular defense response
GO:0007165 TAS signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007204 TAS positive regulation of cytosolic calcium ion concentration
GO:0016021 IEA integral component of membrane
GO:0016493 IEA C-C chemokine receptor activity
GO:0045087 TAS innate immune response
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038968 ccr6b chemokine (C-C motif) receptor 6b protein_coding Danio_rerio
ENSDARG00000087474 ccr6a chemokine (C-C motif) receptor 6a protein_coding Danio_rerio
ENSMUSG00000040899 Ccr6 chemokine (C-C motif) receptor 6 protein_coding Mus_musculus

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